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Project measure / variable:   Graham1   Ifit1_kidney_d12

ID, description, units MPD:63393   Ifit1_kidney_d12   Ifit1 gene expression in kidney, fold change compared to matched control, post infection    day 12  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifit1 gene expression in kidney, fold change compared to matched control, post infection day 12



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means2.9362   None
Median of the strain means2.2174   None
SD of the strain means± 1.7571
Coefficient of variation (CV)0.5984
Min–max range of strain means1.7316   –   6.0279   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 2.2174 0.0   1   0.0 0.0 2.217429877, 2.217429877 -0.41
RIX:CC(005 x 001) m 6.0279 0.0   1   0.0 0.0 6.027944424, 6.027944424 1.76
RIX:CC(017 x 004) m 1.7316 0.0   1   0.0 0.0 1.731573255, 1.731573255 -0.69
RIX:CC(024 x 023) m 2.6172 0.0   1   0.0 0.0 2.617157413, 2.617157413 -0.18
RIX:CC(041 x 012) m 2.0871 0.0   1   0.0 0.0 2.087100396, 2.087100396 -0.48




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA