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Project measure / variable:   Graham1   WNV_IgM_d12

ID, description, units MPD:63362   WNV_IgM_d12   virus-specific IgM in serum, post infection   [ng/mL]  day 12  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure immunoglobulin quantification
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  STRAIN COMPARISON PLOT
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Graham1 - virus-specific IgM in serum, post infection day 12



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means28.599   ng/mL
Median of the strain means23.907   ng/mL
SD of the strain means± 12.662
Coefficient of variation (CV)0.4428
Min–max range of strain means16.029   –   48.942   ng/mL
Mean sample size per strain2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 1008.7777 336.2592 2.795 0.1187
Residuals 7 842.1375 120.3054


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 23.907 7.6577   3 4.4212 0.3203 18.14628, 32.59668 -0.37
RIX:CC(005 x 001) m 48.942 25.704   2   18.175 0.5252 30.76712, 67.11761 1.61
RIX:CC(017 x 004) m 31.68 0.71331   3 0.41183 0.0225 30.97779, 32.40393 0.24
RIX:CC(024 x 023) m 16.029 0.0   1   0.0 0.0 16.02915, 16.02915 -0.99
RIX:CC(041 x 012) m 22.436 5.6196   3 3.2445 0.2505 19.1915, 28.92492 -0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 23.9067 6.3326 38.8809 8.9325
RIX:CC(005 x 001) m 48.9424 7.7558 67.282 30.6028
RIX:CC(017 x 004) m 31.6801 6.3326 46.6543 16.7059
RIX:CC(041 x 012) m 22.436 6.3326 37.4102 7.4618




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA