Project measure / variable:   Graham1   Treg_brain_d28

ID, description, units MPD:63340   Treg_brain_d28   percentage of CD4+ T cells that are Foxp3+ in the brain, post infection   [%]  day 28  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD4+ T cells that are Foxp3+ in the brain, post infection day 28



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means15.114   %
Median of the strain means17.8   %
SD of the strain means± 4.0988
Coefficient of variation (CV)0.2712
Min–max range of strain means9.47   –   18.167   %
Mean sample size per strain2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 2 150.6865 75.3432 8.089 0.0198
Residuals 6 55.8859 9.3143


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 9.47 1.3915   3 0.80339 0.1469 8.28, 11.0 -1.38
RIX:CC(005 x 001) m 17.8 0.0   1   0.0 0.0 17.8, 17.8 0.66
RIX:CC(017 x 004) m 18.167 1.9858   3 1.1465 0.1093 15.9, 19.6 0.74
RIX:CC(024 x 023) m 12.0 0.0   1   0.0 0.0 12.0, 12.0 -0.76
RIX:CC(041 x 012) m 18.133 4.6972   3 2.7119 0.259 13.1, 22.4 0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 9.47 1.762 13.7815 5.1585
RIX:CC(017 x 004) m 18.1667 1.762 22.4782 13.8551
RIX:CC(041 x 012) m 18.1333 1.762 22.4449 13.8218




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA