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Project measure / variable:   Kliethermes1   pct_time_OP

ID, description, units MPD:59942   pct_time_OP   percentage of time spent head dipping during object preference task to assess novelty seeking, 10 min test   [%]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure hole board test
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  STRAIN COMPARISON PLOT
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Kliethermes1 - percentage of time spent head dipping during object preference task to assess novelty seeking, 10 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means57.6   % 59.3   %
Median of the strain means59.4   % 58.8   %
SD of the strain means± 8.23 ± 9.22
Coefficient of variation (CV)0.143 0.155
Min–max range of strain means35.7   –   66.8   % 42.4   –   75.3   %
Mean sample size per strain6.3   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 84.7611 84.7611 0.2065 0.6502
strain 13 9440.2644 726.1742 1.769 0.0523
sex:strain 13 2626.535 202.0412 0.4922 0.9266
Residuals 158 64858.2268 410.4951


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 35.7 36.1   6 14.7 1.01 -2.66
129S1/SvImJ m 53.7 32.7   6 13.4 0.61 6.29, 100.0 -0.61
A/J f 59.4 46.5   6 19.0 0.782 0.22
A/J m 75.3 25.5   6 10.4 0.338 39.6, 99.5 1.74
AKR/J f 56.0 16.7   6 6.8 0.297 37.9, 77.0 -0.2
AKR/J m 46.2 12.3   6 5.02 0.266 26.1, 60.5 -1.42
BALB/cByJ f 55.2 11.4   5 5.12 0.207 47.4, 75.3 -0.29
BALB/cByJ m 58.8 46.2   6 18.9 0.786 -0.05
BTBR T+ Itpr3tf/J f 66.8 11.6   6 4.74 0.174 52.5, 79.7 1.12
BTBR T+ Itpr3tf/J m 66.3 11.2   6 4.57 0.169 49.7, 80.0 0.76
C3H/HeJ f 66.7 9.68   6 3.95 0.145 50.9, 76.2 1.1
C3H/HeJ m 73.4 8.59   6 3.51 0.117 60.7, 82.5 1.53
C57BL/6J f 60.1 18.3   12 5.3 0.305 20.0, 84.0 0.3
C57BL/6J m 62.6 19.3   12 5.57 0.308 25.8, 100.0 0.36
C57L/J f 50.9 17.0   6 6.93 0.333 27.7, 75.0 -0.82
C57L/J m 56.6 6.04   6 2.47 0.107 46.8, 64.5 -0.29
DBA/2J f 63.1 5.95   12 1.72 0.0943 52.8, 73.8 0.67
DBA/2J m 60.3 14.6   12 4.21 0.242 25.5, 84.9 0.11
FVB/NJ f 48.8 12.7   6 5.18 0.26 29.5, 61.7 -1.07
FVB/NJ m 42.4 15.9   6 6.51 0.376 22.1, 65.8 -1.83
NOD/ShiLtJ f 58.4 5.76   5 2.58 0.0985 50.6, 65.8 0.1
NOD/ShiLtJ m 58.9 11.1   6 4.55 0.189 44.3, 72.2 -0.04
NZB/BlNJ f 59.4 26.5   6 10.8 0.446 11.2, 85.2 0.22
NZB/BlNJ m 52.0 15.9   6 6.49 0.306 26.3, 68.4 -0.79
PERA/EiJ f 63.3 13.4   5 5.98 0.211 47.9, 78.5 0.69
PERA/EiJ m 65.4 25.7   4 12.8 0.393 35.3, 95.3 0.66
PL/J f 62.8 9.0   6 3.67 0.143 48.9, 71.2 0.63
PL/J m 58.0 12.3   5 5.51 0.212 44.5, 75.6 -0.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 35.725 8.2714 52.0618 19.3882
129S1/SvImJ m 53.6585 8.2714 69.9953 37.3217
A/J f 59.41 8.2714 75.7468 43.0732
A/J m 75.34 8.2714 91.6768 59.0032
AKR/J f 56.0033 8.2714 72.3401 39.6666
AKR/J m 46.1783 8.2714 62.5151 29.8416
BALB/cByJ f 55.174 9.0609 73.07 37.278
BALB/cByJ m 58.8 8.2714 75.1368 42.4632
BTBR T+ Itpr3tf/J f 66.8067 8.2714 83.1434 50.4699
BTBR T+ Itpr3tf/J m 66.345 8.2714 82.6818 50.0082
C3H/HeJ f 66.6683 8.2714 83.0051 50.3316
C3H/HeJ m 73.37 8.2714 89.7068 57.0332
C57BL/6J f 60.14 5.8488 71.6918 48.5882
C57BL/6J m 62.6042 5.8488 74.156 51.0523
C57L/J f 50.91 8.2714 67.2468 34.5732
C57L/J m 56.5617 8.2714 72.8984 40.2249
DBA/2J f 63.0942 5.8488 74.646 51.5423
DBA/2J m 60.2917 5.8488 71.8435 48.7398
FVB/NJ f 48.7533 8.2714 65.0901 32.4166
FVB/NJ m 42.4233 8.2714 58.7601 26.0866
NOD/ShiLtJ f 58.448 9.0609 76.344 40.552
NOD/ShiLtJ m 58.89 8.2714 75.2268 42.5532
NZB/BlNJ f 59.435 8.2714 75.7718 43.0982
NZB/BlNJ m 52.0083 8.2714 68.3451 35.6716
PERA/EiJ f 63.296 9.0609 81.192 45.4
PERA/EiJ m 65.4 10.1303 85.4084 45.3916
PL/J f 62.7833 8.2714 79.1201 46.4466
PL/J m 58.026 9.0609 75.922 40.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 44.6918 5.8488 56.2436 33.1399
A/J both 67.375 5.8488 78.9268 55.8232
AKR/J both 51.0908 5.8488 62.6427 39.539
BALB/cByJ both 56.987 6.1342 69.1027 44.8713
BTBR T+ Itpr3tf/J both 66.5758 5.8488 78.1277 55.024
C3H/HeJ both 70.0192 5.8488 81.571 58.4673
C57BL/6J both 61.3721 4.1357 69.5405 53.2037
C57L/J both 53.7358 5.8488 65.2877 42.184
DBA/2J both 61.6929 4.1357 69.8613 53.5245
FVB/NJ both 45.5883 5.8488 57.1402 34.0365
NOD/ShiLtJ both 58.669 6.1342 70.7847 46.5533
NZB/BlNJ both 55.7217 5.8488 67.2735 44.1698
PERA/EiJ both 64.348 6.7956 77.77 50.926
PL/J both 60.4047 6.1342 72.5203 48.289




  GWAS USING LINEAR MIXED MODELS