Project measure / variable:   Odet2   sperm_vigor_90

ID, description, units MPD:53838   sperm_vigor_90   percentage of motile sperm that are 'vigorous'   [%]  at 90 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'vigorous' at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means35.1   %
Median of the strain means36.0   %
SD of the strain means± 17.3
Coefficient of variation (CV)0.492
Min–max range of strain means11.9   –   64.5   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 27581.921 3940.2744 38.2887 < 0.0001
Residuals 97 9982.2174 102.9095


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 22.6 7.74   16 1.94 0.342 6.3, 38.3 -0.72
A/J m 38.2 11.1   14 2.97 0.291 10.2, 52.3 0.18
C57BL/6J m 18.1 11.9   11 3.59 0.656 0.5, 33.9 -0.98
CAST/EiJ m 11.9 5.39   12 1.56 0.454 5.2, 23.8 -1.34
NOD/ShiLtJ m 33.9 11.3   10 3.58 0.334 20.4, 51.4 -0.07
NZO/HlLtJ m 45.7 6.86   15 1.77 0.15 29.1, 59.4 0.61
PWK/PhJ m 46.2 12.9   13 3.59 0.28 20.5, 71.0 0.64
WSB/EiJ m 64.5 12.2   14 3.25 0.189 36.9, 80.2 1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 22.6 2.5361 27.6335 17.5665
A/J m 38.1786 2.7112 43.5596 32.7976
C57BL/6J m 18.1182 3.0587 24.1888 12.0476
CAST/EiJ m 11.8917 2.9284 17.7038 6.0795
NOD/ShiLtJ m 33.92 3.208 40.2869 27.5531
NZO/HlLtJ m 45.7467 2.6193 50.9452 40.5481
PWK/PhJ m 46.2 2.8136 51.7841 40.6159
WSB/EiJ m 64.45 2.7112 69.831 59.069




  GWAS USING LINEAR MIXED MODELS