UCLA1: SNP data, 132,000+ locations for 248 inbred and RI strains of mice (2018)

Eskin E

       
This SNP data set was downloaded from http://mouse.cs.ucla.edu/mousehapmap/emma.html on 4 Jun 2018. We converted coordinates to mm10 and annotated with dbSNP rs numbers. Please see their web site for further info. The strains include inbred and several RI panels (AXB BXA, BXD, BXH, CXB) and overlap with the HMDP strain set. This SNP data set is often used in PyLMM GWAS analytics.

Procedures conducted:
• genotyping  SNP profiling, 132,000+ genomic locations, 1-19,X

UCLA1 downloads
Do the following: Click Retrieve SNP Data above, submit a query, then save your results as CSV.
Investigators Eleazar Eskin       University of California, Los Angeles,  Los Angeles, CA
ContactEleazar Eskin     eeskin@cs.ucla.edu     Lab web site
Project type SNP/variation strain survey data set
MPD identifiersUCLA1     MPD:624
Data changelog No updates/corrections.       Initial release date: 06/2018.
Formatted citation
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• SNP profiling, 132,000+ genomic locations, 1-19,X
• 248 strains tested
• Panel: HMDP