MPD: Phenotype measures mapped to MA:0000324, hepatobiliary system

Phenotype measures in Paigen3 associated with ontology term
MA:0000324 'hepatobiliary system'

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All measures in this list are mapped to the ontology descendants of MA:0000324. None are mapped to MA:0000324 directly.

MA:0000356 gall bladder
MA:0000358 liver

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Paigen3:7	Paigen3	organ weights	high-fat diet	liver weight at sacrifice [g] liverweight 2807	obesity mutants	8	both	15-19wks	N=20	2000

Paigen3:8	Paigen3	organ dimensions	high-fat diet	gallbladder volume [µL] gbvol 2808	obesity mutants	8	both	15-19wks	N=18	2000

Paigen3:9	Paigen3	histopathology	high-fat diet	gallbladder, mucin (score: 0-4) [score] mucin 2809	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:10	Paigen3	histopathology	high-fat diet	gallbladder, arc (score: 0-4) [score] arc 2810	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:11	Paigen3	histopathology	high-fat diet	gallbladder, filaments (score: 0-4) [score] filaments 2811	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:12	Paigen3	histopathology	high-fat diet	gallbladder, small liquid crystals (score: 0-4) [score] smallLC 2812	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:13	Paigen3	histopathology	high-fat diet	gallbladder, aggregated liquid crystals (score: 0-4) [score] agLC 2813	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:14	Paigen3	histopathology	high-fat diet	gallbladder, fused liquid crystals (score: 0-4) [score] fusedLC 2814	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:15	Paigen3	histopathology	high-fat diet	gallbladder, cholesterol monohydrate crystals (score: 0-4) [score] ChMC 2815	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:16	Paigen3	histopathology	high-fat diet	gallbladder, number of sandy stones [n] sandysto 2816	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:17	Paigen3	histopathology	high-fat diet	gallbladder, number of true gallstones [n] gs 2817	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:18	Paigen3	histopathology	high-fat diet	gallbladder, number of sandy plus true stones [n] nstones 2818	obesity mutants	7	both	15-19wks	N=8	2000

Paigen3:19	Paigen3	histopathology	high-fat diet	gallbladder, presence of stones (score: 1=present, 0=absent) [score] st_pres 2819	obesity mutants	8	both	15-19wks	N=19	2000

Paigen3:26	Paigen3	lipid profile	high-fat diet	hepatic cholesterol concentration (free per g liver) [mg] freeHCC 2826	obesity mutants	8	both	15-19wks	N=6	2000

Paigen3:27	Paigen3	lipid profile	high-fat diet	hepatic cholesterol concentration (esterified per g liver) [mg] estHCC 2827	obesity mutants	8	both	15-19wks	N=6	2000

Paigen3:28	Paigen3	lipid profile	high-fat diet	hepatic cholesterol concentration (total per g liver) [mg] totHCC 2828	obesity mutants	8	both	15-19wks	N=9	2000

Paigen3:29	Paigen3	lipid profile	high-fat diet	hepatic cholesterol concentration (free to esterified ratio) [ratio] free_to_est 2829	obesity mutants	8	both	15-19wks	N=6	2000

Paigen3:30	Paigen3	histopathology	high-fat diet	liver microvacuoles (score: 0-4) [score] microvacs 2830	obesity mutants	7	both	15-19wks	N=3	2000

Paigen3:31	Paigen3	histopathology	high-fat diet	liver macrovacuoles (score: 0-4) [score] macrovacs 2831	obesity mutants	7	both	15-19wks	N=3	2000

Paigen3:32	Paigen3	histopathology	high-fat diet	liver inflammation (score: 0-4) [score] inflammation 2832	obesity mutants	7	both	15-19wks	N=3	2000

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