MPD: Project measures / variables set: Jaxpheno3 HDL

Project measures / variables set: Jaxpheno3 HDL

ID, description, units	MPD:22835 HDL HDL cholesterol (plasma HDL) [mg/dL]
Measures	• age 8wks • age 16wks
Data set, strains	Jaxpheno3 inbred 11 strains sex: both
Procedure	lipid profile
Comparison	multiple cohorts measured at two age timepoints
Ontology mappings	VT:0000184 blood HDL cholesterol amount MA:0002501 plasma MP:0000184 abnormal circulating HDL cholesterol level

Values Means Δ Means Z-scores

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Jaxpheno3 - HDL cholesterol (plasma HDL)

ANOVA, Q-Q NORMALITY ASSESSMENT

ANOVA Summary

Factor	DF	Sum of squares	Mean sum of squares	F value	p-value (Pr>F)
age	1	0.013	0.013	0.0001	0.9923
sex	1	94643.8095	94643.8095	686.6333	< 0.0001
strain	7	56417.8329	8059.6904	58.4724	< 0.0001
age:sex	1	81.6649	81.6649	0.5925	0.4418
age:strain	7	7749.9022	1107.1289	8.0321	< 0.0001
sex:strain	7	5801.0645	828.7235	6.0123	< 0.0001
age:sex:strain	7	3631.3791	518.7684	3.7636	0.0005
Residuals	545	75121.4302	137.8375

Q-Q normality assessment based on residuals

INDIVIDUAL MEASURES

Project	ID		Treatment	Measure / Variable Description	Panel	Strains tested	Sex	Age
Jaxpheno3	22835	lipid profile	(none)	HDL cholesterol (plasma HDL) [mg/dL] at age 8wks HDL8	inbred	11	both	8wks
Jaxpheno3	22836	lipid profile	(none)	HDL cholesterol (plasma HDL) [mg/dL] at age 16wks HDL16	inbred	8	both	16wks