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Project measure / variable:   CSNA03   activity_w_gray_do

ID, description, units MPD:90297   activity_w_gray_do   percentage of activity counts in novel zone, including center gray zone (novelty preference), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-25wks
Procedure conditioned place preference test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means60.24   % 61.49   %
Median of the strain means58.6   % 62.75   %
SD of the strain means± 6.2503 ± 6.3957
Coefficient of variation (CV)0.1038 0.104
Min–max range of strain means53.38   –   68.11   % 53.24   –   70.1   %
Mean sample size per strain195.4   mice 184.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3130.6639 3130.6639 12.2163 0.0005
strain 8 30925.9326 3865.7416 15.0847 < 0.0001
sex:strain 8 740.8219 92.6027 0.3613 0.9409
Residuals 3399 871057.9718 256.2689


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 67.6 11.873   42 1.832 0.1756 42.955, 95.97 1.18
129S1/SvImJ m 66.28 19.367   45 2.887 0.2922 0.81301, 100.0 0.75
A/J f 54.54 14.424   60 1.8621 0.2644 10.507, 86.56 -0.91
A/J m 53.24 18.132   61 2.3215 0.3405 1.631, 82.94 -1.29
C57BL/6J f 53.38 11.225   58 1.4739 0.2103 27.362, 81.73 -1.1
C57BL/6J m 55.36 10.184   55 1.3732 0.1839 29.524, 76.62 -0.96
CAST/EiJ f 54.74 12.921   31 2.3207 0.236 0.61224, 74.66 -0.88
CAST/EiJ m 55.04 12.065   28 2.28 0.2192 8.2931, 74.21 -1.01
J:DO f 61.45 16.401   1388 0.44023 0.2669 0.19
J:DO m 63.59 17.078   1298 0.47403 0.2686 0.33
NOD/ShiLtJ f 68.07 14.269   42 2.2018 0.2096 3.7257, 88.99 1.25
NOD/ShiLtJ m 69.39 13.229   39 2.1183 0.1906 9.6, 91.65 1.23
NZO/HlLtJ f 55.64 13.978   44 2.1072 0.2512 17.669, 80.79 -0.74
NZO/HlLtJ m 57.68 9.9222   43 1.5131 0.172 38.421, 86.57 -0.6
PWK/PhJ f 68.11 10.89   43 1.6608 0.1599 26.466, 81.76 1.26
PWK/PhJ m 70.1 7.298   42 1.1261 0.1041 51.51, 83.92 1.35
WSB/EiJ f 58.6 9.7497   51 1.3652 0.1664 35.167, 81.98 -0.26
WSB/EiJ m 62.75 9.5671   47 1.3955 0.1525 43.951, 80.48 0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 67.6026428571 2.4701498621 72.4457722238 62.7595134905
129S1/SvImJ m 66.2787624444 2.3863914847 70.9576699299 61.599854959
A/J f 54.54285 2.0666756492 58.5949027444 50.4907972556
A/J m 53.2439836066 2.0496656838 57.2626855555 49.2252816577
C57BL/6J f 53.3823103448 2.1020059973 57.5036339659 49.2609867238
C57BL/6J m 55.3622727273 2.1585723158 59.5945037886 51.130041666
CAST/EiJ f 54.74404 2.8751936503 60.3813233957 49.1067566043
CAST/EiJ m 55.0398607143 3.0253033752 60.9714585675 49.108262861
J:DO f 61.4517477017 0.4296879894 62.2942206836 60.6092747198
J:DO m 63.5863703698 0.4443350794 64.4575613468 62.7151793928
NOD/ShiLtJ f 68.0650404762 2.4701498621 72.9081698428 63.2219111096
NOD/ShiLtJ m 69.3925641026 2.5633956562 74.4185169695 64.3666112356
NZO/HlLtJ f 55.6408181818 2.4133572162 60.3725963566 50.909040007
NZO/HlLtJ m 57.6785348837 2.4412582265 62.4650175137 52.8920522537
PWK/PhJ f 68.1107674419 2.4412582265 72.8972500719 63.3242848118
PWK/PhJ m 70.1045238095 2.4701498621 74.9476531761 65.2613944429
WSB/EiJ f 58.599627451 2.2416244737 62.9946957357 54.2045591663
WSB/EiJ m 62.7484042553 2.3350652382 67.3266783113 58.1701301993


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 66.9407026508 1.7173020017 70.3077517045 63.5736535971
A/J both 53.8934168033 1.4553588607 56.7468838522 51.0399497543
C57BL/6J both 54.3722915361 1.5064746641 57.3259794066 51.4186036655
CAST/EiJ both 54.8919503571 2.0868156985 58.9834909343 50.80040978
J:DO both 62.5190590358 0.3090572079 63.1250158089 61.9131022626
NOD/ShiLtJ both 68.7288022894 1.7799324167 72.2186484279 65.2389561509
NZO/HlLtJ both 56.6596765328 1.7163940968 60.0249454917 53.2944075739
PWK/PhJ both 69.1076456257 1.7364750264 72.5122865036 65.7030047478
WSB/EiJ both 60.6740158531 1.6184413758 63.8472326185 57.5007990878




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA