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Project measure / variable:   CSNA03   rest_time_dark_LD_do

ID, description, units MPD:90162   rest_time_dark_LD_do   resting time in dark, 20 min test (LD box), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means443.1   s 490.6   s
Median of the strain means355.8   s 405.3   s
SD of the strain means± 193.4 ± 197.6
Coefficient of variation (CV)0.4364 0.4028
Min–max range of strain means233.2   –   763.8   s 244.5   –   770.0   s
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2384558.0419 2384558.0419 90.0746 < 0.0001
strain 8 35260179.9116 4407522.489 166.4904 < 0.0001
sex:strain 8 247433.3421 30929.1678 1.1683 0.3142
Residuals 3667 97076998.6912 26473.1384


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 689.0 472.4   49 67.49 0.6857 1.27
129S1/SvImJ m 731.9 394.1   49 56.3 0.5384 1.22
A/J f 614.0 372.0   60 48.028 0.6059 0.88
A/J m 726.9 315.2   61 40.363 0.4337 1.2
C57BL/6J f 352.2 143.2   60 18.491 0.4067 -0.47
C57BL/6J m 389.1 80.18   59 10.438 0.206 218.0, 615.6 -0.51
CAST/EiJ f 269.4 97.33   33 16.943 0.3612 151.3, 728.4 -0.9
CAST/EiJ m 342.0 154.2   30 28.148 0.4508 158.8, 1062.0 -0.75
J:DO f 355.8 146.0   1496 3.7745 0.4103 77.96, 1157.0 -0.45
J:DO m 405.3 135.1   1403 3.6055 0.3332 -0.43
NOD/ShiLtJ f 233.2 118.4   47 17.271 0.5077 49.88, 787.7 -1.09
NOD/ShiLtJ m 244.5 66.71   44 10.057 0.2729 104.7, 378.9 -1.25
NZO/HlLtJ f 763.8 155.0   47 22.604 0.2029 324.3, 1240.0 1.66
NZO/HlLtJ m 770.0 159.7   46 23.542 0.2074 546.9, 1440.0 1.41
PWK/PhJ f 377.3 78.5   47 11.451 0.2081 183.6, 529.4 -0.34
PWK/PhJ m 451.6 110.4   48 15.934 0.2444 315.4, 976.4 -0.2
WSB/EiJ f 332.8 84.85   55 11.441 0.2549 142.6, 586.3 -0.57
WSB/EiJ m 354.5 93.44   51 13.084 0.2636 99.0, 598.9 -0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 688.9716326531 23.2436686348 734.5434278189 643.3998374873
129S1/SvImJ m 731.9008163266 23.2436686348 777.4726114924 686.3290211608
A/J f 614.0376666667 21.0052130231 655.2207208713 572.8546124621
A/J m 726.8714754098 20.8323276714 767.7155686716 686.027382148
C57BL/6J f 352.2246666667 21.0052130231 393.4077208713 311.0416124621
C57BL/6J m 389.1423728814 21.1824753474 430.6729695699 347.6117761929
CAST/EiJ f 269.4363636364 28.3234234623 324.9675825975 213.9051446753
CAST/EiJ m 341.9633333333 29.7058571378 400.2049671294 283.7216995373
J:DO f 355.8069518717 4.2066552225 364.0545668736 347.5593368697
J:DO m 405.3345972915 4.3438405978 413.8511794657 396.8180151173
NOD/ShiLtJ f 233.2046808511 23.7330626946 279.7359874519 186.6733742502
NOD/ShiLtJ m 244.4545454546 24.5288042405 292.545991778 196.3630991311
NZO/HlLtJ f 763.7723404256 23.7330626946 810.3036470264 717.2410338248
NZO/HlLtJ m 769.9543478261 23.9896438021 816.9887101993 722.9199854529
PWK/PhJ f 377.2723404255 23.7330626946 423.8036470264 330.7410338247
PWK/PhJ m 451.6479166667 23.4845421007 497.6919710279 405.6038623054
WSB/EiJ f 332.8309090909 21.9392294754 375.8452063371 289.8166118447
WSB/EiJ m 354.4901960784 22.7833523884 399.1594900933 309.8209020636


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 710.4362244899 16.4357557113 742.6603498825 678.2120990973
A/J both 670.4545710383 14.7919306579 699.4557947538 641.4533473227
C57BL/6J both 370.6835197741 14.9157319296 399.9274696395 341.4395699086
CAST/EiJ both 305.6998484849 20.5222700067 345.9360392419 265.4636577278
J:DO both 380.5707745816 3.0234458528 386.4985761376 374.6429730256
NOD/ShiLtJ both 238.8296131528 17.0654658765 272.2883552969 205.3708710087
NZO/HlLtJ both 766.8633441258 16.8727685533 799.9442817555 733.7824064962
PWK/PhJ both 414.4601285461 16.6941755003 447.1909146503 381.7293424419
WSB/EiJ both 343.6605525847 15.8146367017 374.6669051409 312.6542000284




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA