Project measure / variable:   CSNA03   rears_OFT_do_bin12

ID, description, units MPD:90096   rears_OFT_do_bin12   number of rears in successive 5 min intervals, 60 min test (OFT), DO   [n]  55-60 min  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means34.653   n 43.218   n
Median of the strain means33.485   n 43.533   n
SD of the strain means± 23.265 ± 32.165
Coefficient of variation (CV)0.6714 0.7443
Min–max range of strain means6.0208   –   68.7   n 0.77551   –   100.6   n
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 28068.7988 28068.7988 20.9754 < 0.0001
strain 8 763856.3546 95482.0443 71.3524 < 0.0001
sex:strain 8 30886.716 3860.8395 2.8852 0.0033
Residuals 3625 4850888.7164 1338.1762


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.0208 29.33   48 4.2334 4.8714 -1.23
129S1/SvImJ m 0.77551 2.7406   49 0.39152 3.534 -1.32
A/J f 17.898 26.148   59 3.4042 1.4609 -0.72
A/J m 19.246 31.373   61 4.0169 1.6301 -0.75
C57BL/6J f 68.7 34.131   61 4.37 0.4968 3.0, 169.0 1.46
C57BL/6J m 100.6 36.542   59 4.7574 0.3631 27.0, 212.0 1.78
CAST/EiJ f 33.485 36.186   33 6.2992 1.0807 8.0, 194.0 -0.05
CAST/EiJ m 43.533 38.848   30 7.0926 0.8924 6.0, 177.0 0.01
J:DO f 50.81 36.89   1474 0.96087 0.726 0.69
J:DO m 55.54 38.895   1383 1.0459 0.7003 0.38
NOD/ShiLtJ f 65.47 35.927   47 5.2405 0.5488 1.32
NOD/ShiLtJ m 75.86 45.109   44 6.8005 0.5946 1.01
NZO/HlLtJ f 11.255 13.973   47 2.0381 1.2414 -1.01
NZO/HlLtJ m 8.087 12.612   46 1.8595 1.5595 -1.09
PWK/PhJ f 40.292 35.695   48 5.1522 0.8859 6.0, 205.0 0.24
PWK/PhJ m 51.49 30.412   47 4.4361 0.5907 0.26
WSB/EiJ f 17.945 21.086   55 2.8432 1.175 -0.72
WSB/EiJ m 33.827 42.83   52 5.9395 1.2662 -0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.0208333333 5.2800256423 16.3729499167 -4.33128325
129S1/SvImJ m 0.7755102041 5.2258701016 11.0214484259 -9.4704280177
A/J f 17.8983050847 4.7624523622 27.2356578583 8.5609523112
A/J m 19.2459016393 4.6837287192 28.4289073727 10.062895906
C57BL/6J f 68.7049180328 4.6837287192 77.8879237662 59.5219122994
C57BL/6J m 100.6271186441 4.7624523622 109.9644714176 91.2897658705
CAST/EiJ f 33.4848484848 6.3679505233 45.9699708459 20.9997261238
CAST/EiJ m 43.5333333333 6.6787628535 56.6278401361 30.4388265306
J:DO f 50.8141112619 0.9528135148 52.6822151795 48.9460073442
J:DO m 55.5372378886 0.9836612433 57.465822437 53.6086533403
NOD/ShiLtJ f 65.4680851064 5.3359004856 75.9297509477 55.0064192651
NOD/ShiLtJ m 75.8636363636 5.5148069232 86.6760694977 65.0512032296
NZO/HlLtJ f 11.2553191489 5.3359004856 21.7169849902 0.7936533076
NZO/HlLtJ m 8.0869565217 5.3935875727 18.6617247402 -2.4878116967
PWK/PhJ f 40.2916666667 5.2800256423 50.64378325 29.9395500833
PWK/PhJ m 51.4893617021 5.3359004856 61.9510275434 41.0276958608
WSB/EiJ f 17.9454545455 4.9325932652 27.6163887414 8.2745203495
WSB/EiJ m 33.8269230769 5.0728845489 43.7729149757 23.8809311781


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.3981717687 3.7144444101 10.6807806385 -3.8844371011
A/J both 18.572103362 3.3398453264 25.1202662937 12.0239404304
C57BL/6J both 84.6660183384 3.3398453264 91.2141812701 78.1178554068
CAST/EiJ both 38.5090909091 4.6140185067 47.5554215019 29.4627603163
J:DO both 53.1756745753 0.684734079 54.5181769596 51.833172191
NOD/ShiLtJ both 70.665860735 3.8368258167 78.1884128693 63.1433086007
NZO/HlLtJ both 9.6711378353 3.79350171 17.1087479194 2.2335277513
PWK/PhJ both 45.8905141844 3.753348664 53.2493994588 38.5316289099
WSB/EiJ both 25.8861888112 3.5378183237 32.8225012874 18.9498763349




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA