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Project measure / variable:   CSNA03   habituation_OFT_do

ID, description, units MPD:90057   habituation_OFT_do   habituation ratio (first:last intervals), 60 min test (OFT), DO   [ratio]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means5.0413   ratio 6.1618   ratio
Median of the strain means3.7757   ratio 4.6205   ratio
SD of the strain means± 3.7258 ± 6.6978
Coefficient of variation (CV)0.739 1.087
Min–max range of strain means1.3029   –   13.585   ratio 1.5832   –   23.57   ratio
Mean sample size per strain195.7   mice 181.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 76.318 76.318 0.7758 0.3785
strain 8 5527.0846 690.8856 7.0228 < 0.0001
sex:strain 8 720.1307 90.0163 0.915 0.5027
Residuals 3373 331829.6893 98.3782


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 13.585 16.688   8 5.9001 1.2284 1.2395, 49.997 2.29
129S1/SvImJ m 23.57 54.44   9 18.146 2.3096 0.35649, 167.5 2.6
A/J f 4.0404 8.3269   49 1.1896 2.0609 0.23047, 54.81 -0.27
A/J m 5.7518 8.2478   46 1.2161 1.4339 0.04566, 43.469 -0.06
C57BL/6J f 2.9258 1.4013   61 0.17942 0.479 0.78453, 8.1838 -0.57
C57BL/6J m 2.3504 1.3277   59 0.17285 0.5649 0.81646, 10.174 -0.57
CAST/EiJ f 2.4939 1.4452   33 0.25157 0.5795 0.1459, 6.4197 -0.68
CAST/EiJ m 2.9276 1.7545   30 0.32032 0.5993 0.72246, 8.2974 -0.48
J:DO f 3.4291 10.095   1435 0.26649 2.9439 0.06412, 342.9 -0.43
J:DO m 3.6858 8.6282   1327 0.23686 2.3409 0.06772, 224.9 -0.37
NOD/ShiLtJ f 6.2271 26.024   47 3.796 4.1791 0.83992, 180.7 0.32
NOD/ShiLtJ m 4.6205 5.3579   43 0.81707 1.1596 1.7424, 35.905 -0.23
NZO/HlLtJ f 7.5921 9.5361   25 1.9072 1.2561 0.31856, 36.409 0.68
NZO/HlLtJ m 5.1033 6.7277   19 1.5434 1.3183 1.2577, 28.704 -0.16
PWK/PhJ f 1.3029 0.52959   48 0.07644 0.4065 0.18369, 2.8859 -1.0
PWK/PhJ m 1.5832 0.95962   45 0.14305 0.6061 0.67144, 5.5559 -0.68
WSB/EiJ f 3.7757 7.1891   55 0.96937 1.904 0.58701, 54.22 -0.34
WSB/EiJ m 5.8639 17.908   52 2.4834 3.0539 0.78929, 129.5 -0.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 13.585225 3.5067471775 20.4607903782 6.7096596218
129S1/SvImJ m 23.5703322222 3.3061929455 30.0526774268 17.0879870177
A/J f 4.0403606122 1.4169398338 6.818508557 1.2622126674
A/J m 5.751821087 1.4624146659 8.6191300592 2.8845121147
C57BL/6J f 2.9257595082 1.2699438876 5.4156972721 0.4358217443
C57BL/6J m 2.3503654237 1.2912889772 4.8821538121 -0.1814229646
CAST/EiJ f 2.493860303 1.7266029543 5.8791546779 -0.8914340719
CAST/EiJ m 2.9275896667 1.8108764557 6.4781163607 -0.6229370274
J:DO f 3.429128453 0.2618324678 3.9424948748 2.9157620312
J:DO m 3.6857948832 0.2722789005 4.2196432865 3.1519464799
NOD/ShiLtJ f 6.2270897872 1.4467734176 9.0637314717 3.3904481028
NOD/ShiLtJ m 4.6205372093 1.5125690923 7.5861823376 1.654892081
NZO/HlLtJ f 7.5920544 1.9837157673 11.4814615227 3.7026472773
NZO/HlLtJ m 5.1033421053 2.2754780427 9.5647980522 0.6418861584
PWK/PhJ f 1.30291 1.4316235403 4.1098478116 -1.5040278116
PWK/PhJ m 1.5831855556 1.4785744346 4.4821784618 -1.3158073506
WSB/EiJ f 3.7756696364 1.3374208975 6.3979073836 1.1534318892
WSB/EiJ m 5.8638632692 1.3754594067 8.5606818869 3.1670446515


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 18.5777786111 2.4097815025 23.3025589928 13.8529982294
A/J both 4.8960908496 1.0181324997 6.8923101979 2.8998715013
C57BL/6J both 2.638062466 0.9055640094 4.4135724287 0.8625525032
CAST/EiJ both 2.7107249848 1.2510426951 5.163603794 0.2578461757
J:DO both 3.5574616681 0.1888730002 3.9277788297 3.1871445065
NOD/ShiLtJ both 5.4238134983 1.046544144 7.4757386354 3.3718883612
NZO/HlLtJ both 6.3476982526 1.5093813773 9.3070933315 3.3883031737
PWK/PhJ both 1.4430477778 1.0290442556 3.4606614517 -0.5745658961
WSB/EiJ both 4.8197664528 0.9592423099 6.7005217173 2.9390111883




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA