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Project measure / variable:   CSNA03   amb_dist_OFT_do_bin1

ID, description, units MPD:90021   amb_dist_OFT_do_bin1   distance traveled in successive 5 min intervals, 60 min test (OFT), DO   [cm]  0-5 min  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1839.0   cm 1724.0   cm
Median of the strain means1907.0   cm 1871.0   cm
SD of the strain means± 1074.0 ± 1018.0
Coefficient of variation (CV)0.5841 0.5902
Min–max range of strain means333.9   –   3183.0   cm 477.9   –   3517.0   cm
Mean sample size per strain208.1   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 25572961.0458 25572961.0458 48.135 < 0.0001
strain 8 821147311.2889 102643413.9111 193.2018 < 0.0001
sex:strain 8 15860474.7709 1982559.3464 3.7317 0.0002
Residuals 3626 1926405131.1498 531275.5464


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 333.9 636.1   48 91.81 1.9053 30.968, 3737.0 -1.4
129S1/SvImJ m 477.9 491.8   49 70.26 1.0291 41.475, 1926.0 -1.22
A/J f 630.4 810.8   59 105.6 1.2861 46.306, 3176.0 -1.13
A/J m 599.4 759.9   61 97.29 1.2678 22.843, 3440.0 -1.11
C57BL/6J f 2159.0 440.8   61 56.44 0.2042 1080.0, 3307.0 0.3
C57BL/6J m 1948.0 474.0   59 61.7 0.2433 838.3, 3457.0 0.22
CAST/EiJ f 3099.0 1980.0   33 344.7 0.6389 57.42, 10003.0 1.17
CAST/EiJ m 2289.0 867.9   30 158.5 0.3791 1048.0, 5126.0 0.56
J:DO f 1769.0 727.5   1475 18.942 0.4112 37.24, 7060.0 -0.07
J:DO m 1587.0 697.7   1383 18.761 0.4397 48.585, 9247.0 -0.13
NOD/ShiLtJ f 3183.0 808.7   47 118.0 0.2541 1968.0, 6329.0 1.25
NOD/ShiLtJ m 3517.0 1106.0   44 166.7 0.3144 1979.0, 8938.0 1.76
NZO/HlLtJ f 740.8 411.8   47 60.07 0.5559 145.9, 3086.0 -1.02
NZO/HlLtJ m 660.8 229.9   46 33.897 0.3479 54.84, 1073.0 -1.04
PWK/PhJ f 1907.0 701.0   48 101.2 0.3677 407.7, 5051.0 0.06
PWK/PhJ m 1871.0 701.9   47 102.4 0.3752 22.75, 5219.0 0.14
WSB/EiJ f 2730.0 749.1   55 101.0 0.2744 1780.0, 5410.0 0.83
WSB/EiJ m 2567.0 758.4   52 105.2 0.2954 1673.0, 5765.0 0.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 333.8645833336 105.2057058787 540.1328301082 127.5963365589
129S1/SvImJ m 477.8922040818 104.1266444732 682.0448231686 273.7395849951
A/J f 630.4445084746 94.8929411364 816.4933585441 444.395658405
A/J m 599.3609508197 93.3243547336 782.3344014656 416.3875001737
C57BL/6J f 2158.6229508197 93.3243547336 2341.5964014657 1975.6495001737
C57BL/6J m 1947.9203389831 94.8929411364 2133.9691890526 1761.8714889136
CAST/EiJ f 3099.121818182 126.882855347 3347.8906838969 2850.3529524671
CAST/EiJ m 2289.1666666668 133.075861369 2550.0776541778 2028.2556791558
J:DO f 1768.9982372882 18.9785882273 1806.2080073021 1731.7884672743
J:DO m 1586.8298879248 19.5996728907 1625.2573679816 1548.4024078681
NOD/ShiLtJ f 3183.2340425532 106.3190247755 3391.6850828848 2974.7830022217
NOD/ShiLtJ m 3516.9090909091 109.8837760352 3732.3492482889 3301.4689335294
NZO/HlLtJ f 740.8446808511 106.3190247755 949.2957211827 532.3936405196
NZO/HlLtJ m 660.7965217392 107.4684530428 871.5011523252 450.0918911531
PWK/PhJ f 1906.6958333334 105.2057058787 2112.964080108 1700.4275865587
PWK/PhJ m 1871.0840425532 106.3190247755 2079.5350828848 1662.6330022217
WSB/EiJ f 2729.6909090909 98.2830371356 2922.3864438847 2536.9953742972
WSB/EiJ m 2567.3653846154 101.0783727127 2765.5415058832 2369.1892633476


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 405.8783937077 74.0111455098 550.9860102441 260.7707771713
A/J both 614.9027296471 66.5471739895 745.3763459968 484.4291132974
C57BL/6J both 2053.2716449014 66.5471739895 2183.7452612511 1922.7980285517
CAST/EiJ both 2694.1442424244 91.9353629733 2874.3944102142 2513.8940746345
J:DO both 1677.9140626065 13.6412425068 1704.6593341886 1651.1687910244
NOD/ShiLtJ both 3350.0715667312 76.4496227345 3499.960106676 3200.1830267864
NZO/HlLtJ both 700.8206012951 75.5863801036 849.0166518209 552.6245507694
PWK/PhJ both 1888.8899379433 74.7863215746 2035.5173789654 1742.2624969212
WSB/EiJ both 2648.5281468532 70.4918307658 2786.7357300118 2510.3205636946




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA