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Project measure / variable:   CSNA03   dist_OFT_do

ID, description, units MPD:90003   dist_OFT_do   total distance traveled, 60 min test (OFT), DO   [cm]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means14195.0   cm 12559.0   cm
Median of the strain means14245.0   cm 13668.0   cm
SD of the strain means± 8287.0 ± 7292.0
Coefficient of variation (CV)0.5838 0.5806
Min–max range of strain means2455.0   –   23264.0   cm 2150.0   –   21282.0   cm
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2762024822.1068 2762024822.1068 76.9646 < 0.0001
strain 8 46371015234.4538 5796376904.3067 161.5177 < 0.0001
sex:strain 8 458086514.6273 57260814.3284 1.5956 0.1206
Residuals 3625 130090216527.5072 35886956.2835


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2455.0 8288.0   48 1196.0 3.3753 30.968, 52130.0 -1.42
129S1/SvImJ m 2150.0 2791.0   49 398.8 1.2986 52.33, 11718.0 -1.43
A/J f 5054.0 5104.0   59 664.5 1.0099 99.47, 19442.0 -1.1
A/J m 4688.0 4967.0   61 635.9 1.0594 22.843, 26110.0 -1.08
C57BL/6J f 14245.0 2828.0   61 362.0 0.1985 9074.0, 21488.0 0.01
C57BL/6J m 13668.0 2527.0   59 329.0 0.1849 9494.0, 22043.0 0.15
CAST/EiJ f 23264.0 14874.0   33 2589.0 0.6393 5325.0, 76680.0 1.09
CAST/EiJ m 17278.0 5066.0   30 924.9 0.2932 8634.0, 36577.0 0.65
J:DO f 13440.0 6611.0   1474 172.2 0.4919 95.38, 112065.0 -0.09
J:DO m 11658.0 4772.0   1383 128.3 0.4093 276.0, 43663.0 -0.12
NOD/ShiLtJ f 22951.0 9946.0   47 1451.0 0.4334 12417.0, 69000.0 1.06
NOD/ShiLtJ m 21282.0 6900.0   44 1040.0 0.3242 12731.0, 49517.0 1.2
NZO/HlLtJ f 5003.0 2425.0   47 353.8 0.4848 1874.0, 15420.0 -1.11
NZO/HlLtJ m 4205.0 1256.0   46 185.2 0.2988 2020.0, 7177.0 -1.15
PWK/PhJ f 20493.0 3344.0   48 482.7 0.1632 11853.0, 30807.0 0.76
PWK/PhJ m 18509.0 5153.0   47 751.6 0.2784 29.226, 31060.0 0.82
WSB/EiJ f 20854.0 8535.0   55 1151.0 0.4093 11438.0, 56489.0 0.8
WSB/EiJ m 19597.0 11158.0   52 1547.0 0.5694 10584.0, 76506.0 0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2455.4165833342 864.664630115 4150.6941563589 760.1390103095
129S1/SvImJ m 2149.5538775518 855.7960404954 3827.4435286436 471.6642264599
A/J f 5053.9910169489 779.9060817365 6583.0894019003 3524.8926319974
A/J m 4688.2449672127 767.0141841877 6192.0672577952 3184.4226766301
C57BL/6J f 14244.9344262302 767.0141841877 15748.7567168127 12741.1121356477
C57BL/6J m 13668.4067796615 779.9060817366 15197.5051646131 12139.30839471
CAST/EiJ f 23264.4545454554 1042.8247809393 25309.0362273564 21219.8728635545
CAST/EiJ m 17277.5333333341 1093.7238573401 19421.9086921181 15133.1579745502
J:DO f 13440.4697286294 156.0341182367 13746.393126049 13134.5463312098
J:DO m 11657.8329718002 161.085786829 11973.6607647191 11342.0051788812
NOD/ShiLtJ f 22950.8936170211 873.8147751955 24664.1111348576 21237.6760991846
NOD/ShiLtJ m 21281.977272727 903.1127519893 23052.6369493654 19511.3175960886
NZO/HlLtJ f 5002.8723404253 873.8147751955 6716.0898582618 3289.6548225888
NZO/HlLtJ m 4205.2173913042 883.2616959618 5936.9567178875 2473.4780647209
PWK/PhJ f 20493.0625 864.664630115 22188.3400730246 18797.7849269753
PWK/PhJ m 18508.6005531914 873.8147751955 20221.8180710278 16795.3830353549
WSB/EiJ f 20853.818181818 807.768601918 22437.5443426105 19270.0920210255
WSB/EiJ m 19596.7499999998 830.7429052852 21225.5200077334 17967.9799922661


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2302.485230443 608.2827848746 3495.0957841068 1109.8746767791
A/J both 4871.1179920808 546.9378975429 5943.4546174594 3798.7813667021
C57BL/6J both 13956.6706029459 546.9378975429 15029.0072283246 12884.3339775672
CAST/EiJ both 20270.9939393948 755.5983390426 21752.4341114339 18789.5537673557
J:DO both 12549.1513502148 112.1330423785 12769.0014809111 12329.3012195185
NOD/ShiLtJ both 22116.4354448741 628.324140901 23348.3394543138 20884.5314354343
NZO/HlLtJ both 4604.0448658647 621.2293225741 5822.0386423941 3386.0510893354
PWK/PhJ both 19500.8315265957 614.6538017295 20705.9332145272 18295.7298386641
WSB/EiJ both 20225.2840909089 579.3582417051 21361.1846466874 19089.3835351304




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA