Project measure / variable:   Brinkmeyer1   horiz_time_t1

ID, description, units MPD:64443   horiz_time_t1   time spent moving horizontally, 30 min test, post infection wk 3   [s]  trial 1  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   4 strains     sex: both     age: 4wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - time spent moving horizontally, 30 min test, post infection wk 3 trial 1

CC016/GeniUncCC019/TauUncCC061/GeniUncCC013/GeniUnc s 6007008009001,0001,1001,2001,3001,4001,5001,600femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested3 strains3 strains
Mean of the strain means1427.0   s 964.0   s
Median of the strain means1416.0   s 1057.0   s
SD of the strain means± 157.8 ± 287.0
Coefficient of variation (CV)0.1106 0.2978
Min–max range of strain means1275.0   –   1590.0   s 642.0   –   1193.0   s
Mean sample size per strain1.7   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6724.0 6724.0 0.315 0.6311
Residuals 2 42692.0 21346.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
CC013/GeniUnc m 642.0 0.0   1   0.0 0.0 642.0, 642.0 -1.12
CC016/GeniUnc f 1590.0 10.607   2   7.5 0.0067 1582.0, 1597.0 1.03
CC019/TauUnc f 1416.0 0.0   1   0.0 0.0 1416.0, 1416.0 -0.07
CC019/TauUnc m 1057.0 151.1   3 87.26 0.1429 927.0, 1223.0 0.32
CC061/GeniUnc f 1275.0 63.64   2   45.0 0.0499 1230.0, 1320.0 -0.96
CC061/GeniUnc m 1193.0 196.6   2   139.0 0.1648 1054.0, 1332.0 0.8




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA