Project measure / variable:   Lesage1   cDC1_of_tot

ID, description, units MPD:63528   cDC1_of_tot   percentage of splenic leukocytes that are cDC1 conventional dendritic cells   [%]  
Data set, strains Lesage1   CC w/par   74 strains     sex: both     age: 5-8wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Lesage1 - percentage of splenic leukocytes that are cDC1 conventional dendritic cells

LEL_FHCIV2_FEDONNELL_HACC056/GeniCC033/GeniCC023/GeniJUD_EFCC061/GeniCC032/GeniCC027/GeniCC042/GeniKAV_AFPEF_ECCC026/GeniYOX_DEDET3_GAXAD8_BGLIP_BGC57BL/6JCC043/GeniCC024/GeniFUF_HEXAW2_CDHAZ_FELUF_ADLOD_AESEH_AHLIV_DAVIT_EDLAM_DCCC016/GeniLAT_HDLOM_BGCC010/GeniPAT_CDCC031/GeniHIP_GAXXEN3_DCSTUCKY_HFMERCURI_HFCC030/GeniCC008/GeniWSB/EiJNOD/ShiLtJLUZ_FHWADGALASUPREME_CECC013/GeniXAV_AHXXEN2_DCLUV_DGCC038/GeniFIV_AC129S1/SvImJA/JXAS4_AFXAH3_GHXEQ_EHHAX2_EFVUX2_HFNZO/HlLtJCAST/EiJXEB2_AGXEB_AFLAX_FCHOE_GCPOH_DCCC020/GeniGIT_GCPWK/PhJLOT_FCCC012/GeniLUG_EHCC025/Geni % 0.00.10.20.30.40.50.60.70.80.91.01.11.2femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains63 strains
Mean of the strain means0.33987   % 0.38887   %
Median of the strain means0.30525   % 0.34733   %
SD of the strain means± 0.21514 ± 0.20784
Coefficient of variation (CV)0.633 0.5345
Min–max range of strain means0.027   –   0.93067   % 0.07367   –   0.9815   %
Mean sample size per strain2.3   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0402 0.0402 4.9824 0.0319
strain 11 2.6026 0.2366 29.2893 < 0.0001
sex:strain 11 0.125 0.0114 1.4063 0.2123
Residuals 36 0.2908 0.0081


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 109 (109)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 0.2385 0.01344   2   0.0095 0.0563 0.229, 0.248 -0.47
129S1/SvImJ m 0.2225 0.01485   2   0.0105 0.0667 0.212, 0.233 -0.8
A/J f 0.207 0.07778   2   0.055 0.3758 0.152, 0.262 -0.62
A/J m 0.2405 0.00070711   2   0.0005 0.0029 0.24, 0.241 -0.71
C57BL/6J f 0.502 0.20943   4 0.10471 0.4172 0.389, 0.816 0.75
C57BL/6J m 0.486 0.0   1   0.0 0.0 0.486, 0.486 0.47
CAST/EiJ f 0.1645 0.09263   2   0.0655 0.5631 0.099, 0.23 -0.82
CAST/EiJ m 0.1865 0.01061   2   0.0075 0.0569 0.179, 0.194 -0.97
CC008/Geni m 0.2855 0.05162   2   0.0365 0.1808 0.249, 0.322 -0.5
CC010/Geni f 0.3175 0.12657   2   0.0895 0.3987 0.228, 0.407 -0.1
CC010/Geni m 0.388 0.0   1   0.0 0.0 0.388, 0.388 0.0
CC012/Geni f 0.05967 0.0085049   3 0.00491031 0.1425 0.051, 0.068 -1.3
CC012/Geni m 0.0924 0.03556   5 0.0159 0.3848 0.06, 0.139 -1.43
CC013/Geni m 0.26067 0.05179   3 0.0299 0.1987 0.206, 0.309 -0.62
CC016/Geni m 0.39067 0.07247   3 0.04184 0.1855 0.326, 0.469 0.01
CC020/Geni f 0.141 0.0   1   0.0 0.0 0.141, 0.141 -0.92
CC020/Geni m 0.1005 0.02192   2   0.0155 0.2181 0.085, 0.116 -1.39
CC023/Geni m 0.708 0.06243   3 0.03604 0.0882 0.669, 0.78 1.54
CC024/Geni f 0.3245 0.05303   2   0.0375 0.1634 0.287, 0.362 -0.07
CC024/Geni m 0.657 0.0   1   0.0 0.0 0.657, 0.657 1.29
CC025/Geni f 0.027 0.00781025   3 0.00450925 0.2893 0.018, 0.032 -1.45
CC026/Geni m 0.56633 0.0155   3 0.00895048 0.0274 0.555, 0.584 0.85
CC027/Geni f 0.758 0.0   1   0.0 0.0 0.758, 0.758 1.94
CC027/Geni m 0.591 0.02404   2   0.017 0.0407 0.574, 0.608 0.97
CC030/Geni f 0.2855 0.01626   2   0.0115 0.057 0.274, 0.297 -0.25
CC031/Geni f 0.344 0.0   1   0.0 0.0 0.344, 0.344 0.02
CC031/Geni m 0.3375 0.02051   2   0.0145 0.0608 0.323, 0.352 -0.25
CC032/Geni m 0.68233 0.05749   3 0.03319 0.0843 0.621, 0.735 1.41
CC033/Geni f 0.73133 0.05345   3 0.03086 0.0731 0.67, 0.768 1.82
CC038/Geni f 0.2265 0.00777817   2   0.0055 0.0343 0.221, 0.232 -0.53
CC038/Geni m 0.258 0.0   1   0.0 0.0 0.258, 0.258 -0.63
CC042/Geni m 0.64133 0.04302   3 0.02484 0.0671 0.616, 0.691 1.21
CC043/Geni m 0.49367 0.08119   3 0.04688 0.1645 0.4, 0.544 0.5
CC056/Geni f 0.783 0.0   1   0.0 0.0 0.783, 0.783 2.06
CC056/Geni m 0.793 0.01697   2   0.012 0.0214 0.781, 0.805 1.94
CC061/Geni m 0.69667 0.10893   3 0.06289 0.1564 0.579, 0.794 1.48
CIV2_FE f 0.93067 0.14818   3 0.08555 0.1592 0.797, 1.09 2.75
DET3_GA m 0.51833 0.03213   3 0.01855 0.062 0.488, 0.552 0.62
DONNELL_HA f 0.7455 0.14779   2   0.1045 0.1982 0.641, 0.85 1.89
DONNELL_HA m 0.83767 0.30443   3 0.17577 0.3634 0.509, 1.11 2.16
FIV_AC m 0.23325 0.04419   4 0.0221 0.1895 0.174, 0.273 -0.75
FUF_HE f 0.48933 0.11834   3 0.06832 0.2418 0.357, 0.585 0.69
GALASUPREME_CE m 0.262 0.01752   3 0.01012 0.0669 0.244, 0.279 -0.61
GIT_GC f 0.1 0.0   1   0.0 0.0 0.1, 0.1 -1.11
GIT_GC m 0.136 0.00848528   2   0.006 0.0624 0.13, 0.142 -1.22
HAX2_EF f 0.21 0.02551   3 0.01473 0.1215 0.181, 0.229 -0.6
HAZ_FE f 0.526 0.0   1   0.0 0.0 0.526, 0.526 0.87
HAZ_FE m 0.4375 0.02899   2   0.0205 0.0663 0.417, 0.458 0.23
HIP_GA f 0.251 0.0   1   0.0 0.0 0.251, 0.251 -0.41
HIP_GA m 0.415 0.01697   2   0.012 0.0409 0.403, 0.427 0.13
HOE_GC f 0.086 0.0   1   0.0 0.0 0.086, 0.086 -1.18
HOE_GC m 0.1675 0.02333   2   0.0165 0.1393 0.151, 0.184 -1.07
JUD_EF m 0.70525 0.0988   4 0.0494 0.1401 0.606, 0.814 1.52
KAV_AF f 0.629 0.03394   2   0.024 0.054 0.605, 0.653 1.34
KAV_AF m 0.632 0.0   1   0.0 0.0 0.632, 0.632 1.17
LAM_DC f 0.421 0.0   1   0.0 0.0 0.421, 0.421 0.38
LAM_DC m 0.405 0.05374   2   0.038 0.1327 0.367, 0.443 0.08
LAT_HD f 0.2232 0.07239   5 0.03237 0.3243 0.147, 0.315 -0.54
LAT_HD m 0.5135 0.0502   2   0.0355 0.0978 0.478, 0.549 0.6
LAX_FC f 0.115 0.0   1   0.0 0.0 0.115, 0.115 -1.05
LAX_FC m 0.187 0.0   1   0.0 0.0 0.187, 0.187 -0.97
LEL_FH m 0.9815 0.23829   2   0.1685 0.2428 0.813, 1.15 2.85
LIP_BG f 0.44525 0.03899   4 0.0195 0.0876 0.389, 0.479 0.49
LIP_BG m 0.547 0.0   1   0.0 0.0 0.547, 0.547 0.76
LIV_DA f 0.413 0.0   1   0.0 0.0 0.413, 0.413 0.34
LIV_DA m 0.476 0.01697   2   0.012 0.0357 0.464, 0.488 0.42
LOD_AE f 0.46033 0.09311   3 0.05376 0.2023 0.356, 0.535 0.56
LOM_BG m 0.366 0.0889   3 0.05133 0.2429 0.264, 0.427 -0.11
LOT_FC f 0.09833 0.03847   6 0.01571 0.3913 0.054, 0.147 -1.12
LUF_AD m 0.472 0.06966   5 0.03115 0.1476 0.401, 0.55 0.4
LUG_EH m 0.07367 0.01137   3 0.00656591 0.1544 0.061, 0.083 -1.52
LUV_DG m 0.25125 0.05572   4 0.02786 0.2218 0.192, 0.321 -0.66
LUZ_FH f 0.313 0.04122   4 0.02061 0.1317 0.261, 0.353 -0.12
LUZ_FH m 0.225 0.0   1   0.0 0.0 0.225, 0.225 -0.79
MERCURI_HF m 0.29333 0.01301   3 0.00751295 0.0444 0.28, 0.306 -0.46
NOD/ShiLtJ f 0.2975 0.00212132   2   0.0015 0.0071 0.296, 0.299 -0.2
NOD/ShiLtJ m 0.257 0.03394   2   0.024 0.1321 0.233, 0.281 -0.63
NZO/HlLtJ f 0.1715 0.00212132   2   0.0015 0.0124 0.17, 0.173 -0.78
NZO/HlLtJ m 0.2045 0.05728   2   0.0405 0.2801 0.164, 0.245 -0.89
PAT_CD m 0.34733 0.04179   3 0.02413 0.1203 0.317, 0.395 -0.2
PEF_EC f 0.55633 0.0569   3 0.03285 0.1023 0.491, 0.595 1.01
PEF_EC m 0.65833 0.10171   3 0.05872 0.1545 0.579, 0.773 1.3
POH_DC f 0.12433 0.01721   3 0.0099387 0.1385 0.105, 0.138 -1.0
PWK/PhJ f 0.098 0.0297   2   0.021 0.303 0.077, 0.119 -1.12
PWK/PhJ m 0.1335 0.00212132   2   0.0015 0.0159 0.132, 0.135 -1.23
SEH_AH f 0.424 0.0   1   0.0 0.0 0.424, 0.424 0.39
SEH_AH m 0.48425 0.05688   4 0.02844 0.1175 0.426, 0.536 0.46
STUCKY_HF f 0.35433 0.09108   3 0.05259 0.2571 0.25, 0.418 0.07
STUCKY_HF m 0.285 0.0   1   0.0 0.0 0.285, 0.285 -0.5
VIT_ED f 0.419 0.081   3 0.04677 0.1933 0.338, 0.5 0.37
VUX2_HF m 0.20333 0.02991   3 0.01727 0.1471 0.171, 0.23 -0.89
WAD f 0.265 0.04058   3 0.02343 0.1531 0.223, 0.304 -0.35
WSB/EiJ f 0.332 0.03818   2   0.027 0.115 0.305, 0.359 -0.04
WSB/EiJ m 0.237 0.0594   2   0.042 0.2506 0.195, 0.279 -0.73
XAD8_BG f 0.43 0.0   1   0.0 0.0 0.43, 0.43 0.42
XAD8_BG m 0.585 0.06409   3 0.037 0.1096 0.523, 0.651 0.94
XAH3_GH m 0.215 0.02179   3 0.01258 0.1014 0.2, 0.24 -0.84
XAS4_AF m 0.22067 0.0023094   3 0.00133333 0.0105 0.218, 0.222 -0.81
XAV_AH m 0.25367 0.02996   3 0.01729 0.1181 0.229, 0.287 -0.65
XAW2_CD m 0.483 0.00282843   2   0.002 0.0059 0.481, 0.485 0.45
XEB2_AG f 0.15133 0.01069   3 0.00617342 0.0707 0.142, 0.163 -0.88
XEB2_AG m 0.18033 0.03219   3 0.01859 0.1785 0.145, 0.208 -1.0
XEB_AF f 0.165 0.00707107   2   0.005 0.0429 0.16, 0.17 -0.81
XEB_AF m 0.159 0.0   1   0.0 0.0 0.159, 0.159 -1.11
XEQ_EH m 0.21033 0.02503   3 0.01445 0.119 0.186, 0.236 -0.86
XXEN2_DC m 0.252 0.02778   3 0.01604 0.1103 0.22, 0.27 -0.66
XXEN3_DC f 0.279 0.0   1   0.0 0.0 0.279, 0.279 -0.28
XXEN3_DC m 0.385 0.0   1   0.0 0.0 0.385, 0.385 -0.02
YOX_DE m 0.53067 0.02779   3 0.01605 0.0524 0.499, 0.551 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.2385 0.0636 0.3674 0.1096
129S1/SvImJ m 0.2225 0.0636 0.3514 0.0936
A/J f 0.207 0.0636 0.3359 0.0781
A/J m 0.2405 0.0636 0.3694 0.1116
CAST/EiJ f 0.1645 0.0636 0.2934 0.0356
CAST/EiJ m 0.1865 0.0636 0.3154 0.0576
CC012/Geni f 0.0597 0.0519 0.1649 -0.0456
CC012/Geni m 0.0924 0.0402 0.1739 0.0109
DONNELL_HA f 0.7455 0.0636 0.8744 0.6166
DONNELL_HA m 0.8377 0.0519 0.9429 0.7324
LAT_HD f 0.2232 0.0402 0.3047 0.1417
LAT_HD m 0.5135 0.0636 0.6424 0.3846
NOD/ShiLtJ f 0.2975 0.0636 0.4264 0.1686
NOD/ShiLtJ m 0.257 0.0636 0.3859 0.1281
NZO/HlLtJ f 0.1715 0.0636 0.3004 0.0426
NZO/HlLtJ m 0.2045 0.0636 0.3334 0.0756
PEF_EC f 0.5563 0.0519 0.6616 0.4511
PEF_EC m 0.6583 0.0519 0.7636 0.5531
PWK/PhJ f 0.098 0.0636 0.2269 -0.0309
PWK/PhJ m 0.1335 0.0636 0.2624 0.0046
WSB/EiJ f 0.332 0.0636 0.4609 0.2031
WSB/EiJ m 0.237 0.0636 0.3659 0.1081
XEB2_AG f 0.1513 0.0519 0.2566 0.0461
XEB2_AG m 0.1803 0.0519 0.2856 0.0751


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.2305 0.0449 0.3216 0.1394
A/J both 0.2237 0.0449 0.3149 0.1326
CAST/EiJ both 0.1755 0.0449 0.2666 0.0844
CC012/Geni both 0.076 0.0328 0.1426 0.0095
DONNELL_HA both 0.7916 0.041 0.8748 0.7084
LAT_HD both 0.3683 0.0376 0.4446 0.2921
NOD/ShiLtJ both 0.2772 0.0449 0.3684 0.1861
NZO/HlLtJ both 0.188 0.0449 0.2791 0.0969
PEF_EC both 0.6073 0.0367 0.6817 0.5329
PWK/PhJ both 0.1157 0.0449 0.2069 0.0246
WSB/EiJ both 0.2845 0.0449 0.3756 0.1934
XEB2_AG both 0.1658 0.0367 0.2402 0.0914




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA