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Project measure / variable:   Lesage1   mDC_of_tot

ID, description, units MPD:63526   mDC_of_tot   percentage of splenic leukocytes that are merocytic dendritic cells   [%]  
Data set, strains Lesage1   CC w/par   74 strains     sex: both     age: 5-8wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Lesage1 - percentage of splenic leukocytes that are merocytic dendritic cells



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains63 strains
Mean of the strain means0.39148   % 0.40346   %
Median of the strain means0.32225   % 0.3775   %
SD of the strain means± 0.2099 ± 0.18676
Coefficient of variation (CV)0.5362 0.4629
Min–max range of strain means0.127   –   1.26   % 0.1295   –   1.073   %
Mean sample size per strain2.3   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0466 0.0466 5.0443 0.0309
strain 11 0.982 0.0893 9.6652 < 0.0001
sex:strain 11 0.1484 0.0135 1.4607 0.1895
Residuals 36 0.3325 0.0092


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.317 0.02121   2   0.015 0.0669 0.302, 0.332 -0.35
129S1/SvImJ m 0.3025 0.01626   2   0.0115 0.0538 0.291, 0.314 -0.54
A/J f 0.127 0.01697   2   0.012 0.1336 0.115, 0.139 -1.26
A/J m 0.1825 0.03041   2   0.0215 0.1666 0.161, 0.204 -1.18
C57BL/6J f 0.2495 0.10339   4 0.0517 0.4144 0.17, 0.4 -0.68
C57BL/6J m 0.303 0.0   1   0.0 0.0 0.303, 0.303 -0.54
CAST/EiJ f 0.2865 0.1195   2   0.0845 0.4171 0.202, 0.371 -0.5
CAST/EiJ m 0.3115 0.05303   2   0.0375 0.1703 0.274, 0.349 -0.49
CC008/Geni m 0.1295 0.03748   2   0.0265 0.2894 0.103, 0.156 -1.47
CC010/Geni f 0.4725 0.12516   2   0.0885 0.2649 0.384, 0.561 0.39
CC010/Geni m 0.728 0.0   1   0.0 0.0 0.728, 0.728 1.74
CC012/Geni f 0.16833 0.06252   3 0.03609 0.3714 0.105, 0.23 -1.06
CC012/Geni m 0.1504 0.06109   5 0.02732 0.4062 0.102, 0.253 -1.35
CC013/Geni m 0.28533 0.03102   3 0.01791 0.1087 0.255, 0.317 -0.63
CC016/Geni m 0.13333 0.0212   3 0.01224 0.159 0.114, 0.156 -1.45
CC020/Geni f 0.558 0.0   1   0.0 0.0 0.558, 0.558 0.79
CC020/Geni m 0.508 0.11031   2   0.078 0.2171 0.43, 0.586 0.56
CC023/Geni m 0.46767 0.04086   3 0.02359 0.0874 0.421, 0.497 0.34
CC024/Geni f 0.271 0.0396   2   0.028 0.1461 0.243, 0.299 -0.57
CC024/Geni m 0.631 0.0   1   0.0 0.0 0.631, 0.631 1.22
CC025/Geni f 0.43067 0.05029   3 0.02904 0.1168 0.374, 0.47 0.19
CC026/Geni m 0.31333 0.01966   3 0.01135 0.0627 0.301, 0.336 -0.48
CC027/Geni f 0.344 0.0   1   0.0 0.0 0.344, 0.344 -0.23
CC027/Geni m 0.341 0.0198   2   0.014 0.0581 0.327, 0.355 -0.33
CC030/Geni f 0.253 0.03677   2   0.026 0.1453 0.227, 0.279 -0.66
CC031/Geni f 0.468 0.0   1   0.0 0.0 0.468, 0.468 0.36
CC031/Geni m 0.3885 0.05445   2   0.0385 0.1401 0.35, 0.427 -0.08
CC032/Geni m 0.45133 0.06108   3 0.03526 0.1353 0.386, 0.507 0.26
CC033/Geni f 0.28233 0.01818   3 0.01049 0.0644 0.262, 0.297 -0.52
CC038/Geni f 0.306 0.04525   2   0.032 0.1479 0.274, 0.338 -0.41
CC038/Geni m 0.397 0.0   1   0.0 0.0 0.397, 0.397 -0.03
CC042/Geni m 0.72033 0.05486   3 0.03167 0.0762 0.681, 0.783 1.7
CC043/Geni m 0.67067 0.05064   3 0.02924 0.0755 0.618, 0.719 1.43
CC056/Geni f 0.577 0.0   1   0.0 0.0 0.577, 0.577 0.88
CC056/Geni m 0.463 0.0594   2   0.042 0.1283 0.421, 0.505 0.32
CC061/Geni m 0.41067 0.03197   3 0.01846 0.0779 0.376, 0.439 0.04
CIV2_FE f 0.50633 0.06706   3 0.03872 0.1324 0.441, 0.575 0.55
DET3_GA m 0.178 0.01929   3 0.01114 0.1084 0.156, 0.192 -1.21
DONNELL_HA f 0.489 0.22486   2   0.159 0.4598 0.33, 0.648 0.46
DONNELL_HA m 0.64167 0.30333   3 0.17513 0.4727 0.319, 0.921 1.28
FIV_AC m 0.31125 0.07405   4 0.03702 0.2379 0.243, 0.407 -0.49
FUF_HE f 0.61467 0.0617   3 0.03562 0.1004 0.559, 0.681 1.06
GALASUPREME_CE m 0.559 0.04521   3 0.0261 0.0809 0.509, 0.597 0.83
GIT_GC f 0.422 0.0   1   0.0 0.0 0.422, 0.422 0.15
GIT_GC m 0.513 0.04808   2   0.034 0.0937 0.479, 0.547 0.59
HAX2_EF f 0.66133 0.12428   3 0.07175 0.1879 0.518, 0.739 1.29
HAZ_FE f 0.355 0.0   1   0.0 0.0 0.355, 0.355 -0.17
HAZ_FE m 0.368 0.08202   2   0.058 0.2229 0.31, 0.426 -0.19
HIP_GA f 0.229 0.0   1   0.0 0.0 0.229, 0.229 -0.77
HIP_GA m 0.3775 0.04879   2   0.0345 0.1292 0.343, 0.412 -0.14
HOE_GC f 0.206 0.0   1   0.0 0.0 0.206, 0.206 -0.88
HOE_GC m 0.2255 0.00494975   2   0.0035 0.022 0.222, 0.229 -0.95
JUD_EF m 0.4925 0.22219   4 0.11109 0.4511 0.289, 0.775 0.48
KAV_AF f 0.304 0.00848528   2   0.006 0.0279 0.298, 0.31 -0.42
KAV_AF m 0.344 0.0   1   0.0 0.0 0.344, 0.344 -0.32
LAM_DC f 0.177 0.0   1   0.0 0.0 0.177, 0.177 -1.02
LAM_DC m 0.196 0.06081   2   0.043 0.3103 0.153, 0.239 -1.11
LAT_HD f 0.2812 0.06909   5 0.0309 0.2457 0.166, 0.344 -0.53
LAT_HD m 0.5935 0.01485   2   0.0105 0.025 0.583, 0.604 1.02
LAX_FC f 0.142 0.0   1   0.0 0.0 0.142, 0.142 -1.19
LAX_FC m 0.224 0.0   1   0.0 0.0 0.224, 0.224 -0.96
LEL_FH m 0.501 0.05657   2   0.04 0.1129 0.461, 0.541 0.52
LIP_BG f 0.5615 0.08573   4 0.04287 0.1527 0.466, 0.671 0.81
LIP_BG m 0.786 0.0   1   0.0 0.0 0.786, 0.786 2.05
LIV_DA f 0.453 0.0   1   0.0 0.0 0.453, 0.453 0.29
LIV_DA m 0.481 0.0297   2   0.021 0.0617 0.46, 0.502 0.42
LOD_AE f 0.24267 0.08105   3 0.0468 0.334 0.16, 0.322 -0.71
LOM_BG m 0.41767 0.05918   3 0.03417 0.1417 0.351, 0.464 0.08
LOT_FC f 0.704 0.04969   6 0.02028 0.0706 0.624, 0.754 1.49
LUF_AD m 0.2874 0.08151   5 0.03645 0.2836 0.186, 0.379 -0.62
LUG_EH m 0.161 0.00953939   3 0.00550757 0.0593 0.155, 0.172 -1.3
LUV_DG m 0.3325 0.18023   4 0.09012 0.542 0.155, 0.518 -0.38
LUZ_FH f 0.5355 0.1419   4 0.07095 0.265 0.443, 0.743 0.69
LUZ_FH m 0.482 0.0   1   0.0 0.0 0.482, 0.482 0.42
MERCURI_HF m 0.31933 0.0155   3 0.00895048 0.0485 0.308, 0.337 -0.45
NOD/ShiLtJ f 0.3275 0.05728   2   0.0405 0.1749 0.287, 0.368 -0.3
NOD/ShiLtJ m 0.4735 0.03465   2   0.0245 0.0732 0.449, 0.498 0.38
NZO/HlLtJ f 0.2295 0.01485   2   0.0105 0.0647 0.219, 0.24 -0.77
NZO/HlLtJ m 0.2565 0.06152   2   0.0435 0.2398 0.213, 0.3 -0.79
PAT_CD m 0.26 0.01758   3 0.01015 0.0676 0.24, 0.273 -0.77
PEF_EC f 0.19833 0.05802   3 0.0335 0.2925 0.154, 0.264 -0.92
PEF_EC m 0.20633 0.05914   3 0.03414 0.2866 0.155, 0.271 -1.06
POH_DC f 0.48067 0.0624   3 0.03603 0.1298 0.429, 0.55 0.42
PWK/PhJ f 0.3415 0.01344   2   0.0095 0.0393 0.332, 0.351 -0.24
PWK/PhJ m 0.3375 0.0601   2   0.0425 0.1781 0.295, 0.38 -0.35
SEH_AH f 1.26 0.0   1   0.0 0.0 1.26, 1.26 4.14
SEH_AH m 1.073 0.0945   4 0.04725 0.0881 0.952, 1.17 3.58
STUCKY_HF f 0.77333 0.09996   3 0.05771 0.1293 0.658, 0.835 1.82
STUCKY_HF m 0.792 0.0   1   0.0 0.0 0.792, 0.792 2.08
VIT_ED f 0.198 0.0167   3 0.00964365 0.0844 0.18, 0.213 -0.92
VUX2_HF m 0.455 0.013   3 0.00750555 0.0286 0.442, 0.468 0.28
WAD f 0.28633 0.07757   3 0.04478 0.2709 0.207, 0.362 -0.5
WSB/EiJ f 0.2205 0.02899   2   0.0205 0.1315 0.2, 0.241 -0.81
WSB/EiJ m 0.177 0.04808   2   0.034 0.2717 0.143, 0.211 -1.21
XAD8_BG f 0.313 0.0   1   0.0 0.0 0.313, 0.313 -0.37
XAD8_BG m 0.358 0.04776   3 0.02757 0.1334 0.327, 0.413 -0.24
XAH3_GH m 0.57333 0.03544   3 0.02046 0.0618 0.549, 0.614 0.91
XAS4_AF m 0.25133 0.03943   3 0.02276 0.1569 0.209, 0.287 -0.81
XAV_AH m 0.49967 0.06879   3 0.03972 0.1377 0.423, 0.556 0.52
XAW2_CD m 0.3955 0.07707   2   0.0545 0.1949 0.341, 0.45 -0.04
XEB2_AG f 0.40233 0.01922   3 0.0111 0.0478 0.385, 0.423 0.05
XEB2_AG m 0.499 0.05903   3 0.03408 0.1183 0.461, 0.567 0.51
XEB_AF f 0.718 0.02263   2   0.016 0.0315 0.702, 0.734 1.56
XEB_AF m 0.57 0.0   1   0.0 0.0 0.57, 0.57 0.89
XEQ_EH m 0.22867 0.03653   3 0.02109 0.1597 0.193, 0.266 -0.94
XXEN2_DC m 0.17533 0.0085049   3 0.00491031 0.0485 0.169, 0.185 -1.22
XXEN3_DC f 0.264 0.0   1   0.0 0.0 0.264, 0.264 -0.61
XXEN3_DC m 0.315 0.0   1   0.0 0.0 0.315, 0.315 -0.47
YOX_DE m 0.441 0.03208   3 0.01852 0.0727 0.421, 0.478 0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.317 0.068 0.4548 0.1792
129S1/SvImJ m 0.3025 0.068 0.4403 0.1647
A/J f 0.127 0.068 0.2648 -0.0108
A/J m 0.1825 0.068 0.3203 0.0447
CAST/EiJ f 0.2865 0.068 0.4243 0.1487
CAST/EiJ m 0.3115 0.068 0.4493 0.1737
CC012/Geni f 0.1683 0.0555 0.2809 0.0558
CC012/Geni m 0.1504 0.043 0.2376 0.0632
DONNELL_HA f 0.489 0.068 0.6268 0.3512
DONNELL_HA m 0.6417 0.0555 0.7542 0.5291
LAT_HD f 0.2812 0.043 0.3684 0.194
LAT_HD m 0.5935 0.068 0.7313 0.4557
NOD/ShiLtJ f 0.3275 0.068 0.4653 0.1897
NOD/ShiLtJ m 0.4735 0.068 0.6113 0.3357
NZO/HlLtJ f 0.2295 0.068 0.3673 0.0917
NZO/HlLtJ m 0.2565 0.068 0.3943 0.1187
PEF_EC f 0.1983 0.0555 0.3109 0.0858
PEF_EC m 0.2063 0.0555 0.3189 0.0938
PWK/PhJ f 0.3415 0.068 0.4793 0.2037
PWK/PhJ m 0.3375 0.068 0.4753 0.1997
WSB/EiJ f 0.2205 0.068 0.3583 0.0827
WSB/EiJ m 0.177 0.068 0.3148 0.0392
XEB2_AG f 0.4023 0.0555 0.5149 0.2898
XEB2_AG m 0.499 0.0555 0.6115 0.3865


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.3098 0.0481 0.4072 0.2123
A/J both 0.1548 0.0481 0.2522 0.0573
CAST/EiJ both 0.299 0.0481 0.3965 0.2015
CC012/Geni both 0.1594 0.0351 0.2305 0.0882
DONNELL_HA both 0.5653 0.0439 0.6543 0.4764
LAT_HD both 0.4374 0.0402 0.5189 0.3558
NOD/ShiLtJ both 0.4005 0.0481 0.498 0.303
NZO/HlLtJ both 0.243 0.0481 0.3405 0.1455
PEF_EC both 0.2023 0.0392 0.2819 0.1228
PWK/PhJ both 0.3395 0.0481 0.437 0.242
WSB/EiJ both 0.1988 0.0481 0.2962 0.1013
XEB2_AG both 0.4507 0.0392 0.5302 0.3711




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA