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Project measure / variable:   Peters1   RBC

ID, description, units MPD:6202   RBC   red blood cell count (RBC; per volume x 106)   [n/µL]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters1 - red blood cell count (RBC; per volume x 106)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means9.11   n/µL 9.23   n/µL
Median of the strain means9.10   n/µL 9.25   n/µL
SD of the strain means± 0.544 ± 0.625
Coefficient of variation (CV)0.0597 0.0677
Min–max range of strain means7.96   –   10.6   n/µL 7.79   –   10.4   n/µL
Mean sample size per strain11.8   mice 11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.0253 4.0253 7.9871 0.0048
strain 42 295.8304 7.0436 13.9761 < 0.0001
sex:strain 42 53.6454 1.2773 2.5344 < 0.0001
Residuals 923 465.1663 0.504


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 8.85 0.503   14 0.135 0.0569 7.67, 9.58 -0.48
129S1/SvImJ m 10.4 0.546   15 0.141 0.0526 9.47, 11.5 1.88
A/J f 9.19 0.361   10 0.114 0.0393 8.66, 9.66 0.15
A/J m 9.41 0.699   10 0.221 0.0743 7.66, 10.1 0.29
AKR/J f 9.14 0.573   10 0.181 0.0626 8.12, 10.1 0.06
AKR/J m 9.56 0.517   9 0.172 0.054 8.5, 10.2 0.53
BALB/cByJ f 9.04 0.333   15 0.086 0.0368 8.36, 9.6 -0.13
BALB/cByJ m 9.26 0.51   29 0.0947 0.0551 7.6, 10.3 0.05
BALB/cJ f 9.45 0.209   11 0.063 0.0221 8.99, 9.76 0.63
BALB/cJ m 8.28 0.538   5 0.241 0.065 7.41, 8.82 -1.52
BTBR T+ Itpr3tf/J f 8.27 0.336   10 0.106 0.0407 7.84, 9.0 -1.54
BTBR T+ Itpr3tf/J m 8.89 0.603   10 0.191 0.0678 7.79, 9.62 -0.54
BUB/BnJ f 8.94 0.17   14 0.0455 0.019 8.69, 9.25 -0.31
BUB/BnJ m 9.11 0.43   10 0.136 0.0472 8.25, 9.63 -0.19
C3H/HeJ f 8.96 0.549   10 0.174 0.0613 7.87, 9.42 -0.28
C3H/HeJ m 9.33 0.777   10 0.246 0.0832 7.4, 10.1 0.16
C57BL/10J f 9.85 0.556   20 0.124 0.0564 8.94, 11.0 1.36
C57BL/10J m 10.1 0.79   15 0.204 0.0783 8.37, 11.1 1.4
C57BL/6J f 9.19 0.693   11 0.209 0.0754 7.83, 10.2 0.15
C57BL/6J m 9.34 0.627   11 0.189 0.0671 8.38, 10.7 0.18
C57BLKS/J f 9.48 0.516   10 0.163 0.0545 8.4, 9.98 0.68
C57BLKS/J m 9.03 1.01   10 0.319 0.112 7.62, 10.4 -0.32
C57BR/cdJ f 9.82 0.472   10 0.149 0.0481 8.65, 10.3 1.31
C57BR/cdJ m 10.1 0.496   12 0.143 0.0491 9.18, 10.7 1.4
C57L/J f 9.9 0.675   12 0.195 0.0681 8.59, 11.2 1.45
C57L/J m 10.4 0.539   15 0.139 0.0519 9.17, 11.4 1.88
C58/J f 8.38 0.779   11 0.235 0.093 6.44, 9.03 -1.34
C58/J m 8.9 0.437   9 0.146 0.0491 8.45, 9.93 -0.52
CAST/EiJ f 8.91 0.473   12 0.136 0.0531 7.98, 9.48 -0.37
CAST/EiJ m 8.56 0.891   11 0.269 0.104 7.39, 10.1 -1.07
CBA/J f 9.23 0.161   9 0.0536 0.0174 9.04, 9.52 0.22
CBA/J m 9.42 0.321   10 0.102 0.0341 9.11, 10.1 0.31
CE/J f 8.99 1.14   13 0.317 0.127 7.0, 10.2 -0.22
CE/J m 9.82 0.713   8 0.252 0.0726 8.71, 10.6 0.95
CZECHII/EiJ f 8.81 1.06   11 0.32 0.121 6.26, 9.9 -0.55
CZECHII/EiJ m 8.97 0.771   11 0.232 0.086 7.69, 10.0 -0.41
DBA/1J f 10.6 0.395   14 0.106 0.0373 10.0, 11.2 2.74
DBA/1J m 10.4 0.531   11 0.16 0.0511 9.56, 11.3 1.88
DBA/2J f 9.88 0.782   13 0.217 0.0791 8.07, 10.8 1.42
DBA/2J m 10.0 0.993   10 0.314 0.0992 8.97, 12.4 1.24
FVB/NJ f 9.1 0.485   12 0.14 0.0533 8.24, 10.0 -0.02
FVB/NJ m 8.62 0.963   12 0.278 0.112 5.89, 9.71 -0.97
I/LnJ f 9.66 0.716   13 0.199 0.0741 8.53, 11.0 1.01
I/LnJ m 9.27 1.54   14 0.412 0.166 4.45, 10.4 0.07
JF1/MsJ f 8.03 1.2   12 0.345 0.149 4.68, 9.0 -1.99
JF1/MsJ m 8.46 0.754   16 0.188 0.0891 7.0, 9.35 -1.23
KK/HlJ f 9.49 0.365   14 0.0977 0.0385 8.91, 10.2 0.7
KK/HlJ m 9.27 0.926   11 0.279 0.0998 7.95, 10.8 0.07
LP/J f 9.12 0.96   15 0.248 0.105 7.33, 10.3 0.02
LP/J m 9.3 0.531   10 0.168 0.0571 8.35, 10.1 0.12
MA/MyJ f 8.36 1.05   12 0.304 0.126 5.59, 9.36 -1.38
MA/MyJ m 9.13 0.525   13 0.146 0.0574 7.88, 9.9 -0.16
MOLF/EiJ f 8.22 0.874   13 0.243 0.106 6.24, 9.18 -1.64
MOLF/EiJ m 8.22 0.784   15 0.202 0.0954 6.73, 9.51 -1.61
MSM/MsJ f 7.96 0.506   11 0.153 0.0636 6.9, 8.59 -2.12
MSM/MsJ m 7.79 1.27   11 0.383 0.163 5.51, 10.3 -2.3
NOD/ShiLtJ f 8.76 0.282   10 0.0892 0.0322 8.16, 9.08 -0.64
NOD/ShiLtJ m 8.53 0.649   10 0.205 0.0761 7.03, 9.28 -1.12
NON/ShiLtJ f 9.43 0.359   10 0.113 0.038 8.72, 9.87 0.59
NON/ShiLtJ m 9.0 0.397   10 0.126 0.0441 8.2, 9.46 -0.36
NZB/BlNJ f 8.72 0.836   12 0.241 0.0958 6.29, 9.73 -0.72
NZB/BlNJ m 9.25 0.534   9 0.178 0.0577 8.5, 10.2 0.04
NZW/LacJ f 8.73 0.446   12 0.129 0.0511 7.96, 9.54 -0.7
NZW/LacJ m 8.74 0.475   10 0.15 0.0544 7.84, 9.51 -0.78
PERA/EiJ f 9.64 0.664   11 0.2 0.0689 8.38, 10.8 0.97
PERA/EiJ m 9.08 1.42   8 0.501 0.156 6.88, 10.7 -0.24
PL/J f 9.68 0.777   16 0.194 0.0803 8.31, 10.8 1.05
PL/J m 9.45 0.978   10 0.309 0.104 8.27, 11.4 0.36
PWK/PhJ f 9.05 0.32   13 0.0887 0.0354 8.6, 9.59 -0.11
PWK/PhJ m 9.7 0.396   12 0.114 0.0408 9.03, 10.4 0.76
RF/J f 9.5 0.682   10 0.216 0.0717 8.62, 11.0 0.72
RF/J m 9.99 0.988   16 0.247 0.0989 7.54, 11.0 1.22
RIIIS/J f 9.19 0.603   11 0.182 0.0657 7.55, 9.93 0.15
RIIIS/J m 9.41 0.802   16 0.201 0.0853 7.31, 11.1 0.29
SEA/GnJ f 9.07 0.795   10 0.251 0.0876 7.44, 10.2 -0.07
SEA/GnJ m 8.9 1.33   9 0.444 0.15 6.36, 10.5 -0.52
SJL/J f 9.32 0.625   8 0.221 0.067 8.6, 10.5 0.39
SJL/J m 8.72 0.875   14 0.234 0.1 6.92, 9.85 -0.81
SM/J f 8.87 0.375   11 0.113 0.0423 8.34, 9.49 -0.44
SM/J m 8.76 0.326   10 0.103 0.0372 8.04, 9.17 -0.75
SPRET/EiJ f 9.49 0.318   11 0.0958 0.0335 8.95, 9.99 0.7
SPRET/EiJ m 10.3 0.441   11 0.133 0.0429 9.31, 10.9 1.72
SWR/J f 8.84 0.608   13 0.168 0.0687 7.41, 9.51 -0.5
SWR/J m 8.63 0.873   11 0.263 0.101 7.67, 9.65 -0.96
WSB/EiJ f 8.62 0.26   11 0.0784 0.0302 8.26, 9.14 -0.9
WSB/EiJ m 8.96 0.473   9 0.158 0.0528 8.35, 9.65 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8.8507 0.1897 9.2231 8.4784
129S1/SvImJ m 10.362 0.1833 10.7217 10.0023
A/J f 9.188 0.2245 9.6286 8.7474
A/J m 9.41 0.2245 9.8506 8.9694
AKR/J f 9.144 0.2245 9.5846 8.7034
AKR/J m 9.5622 0.2366 10.0266 9.0978
BALB/cByJ f 9.0447 0.1833 9.4044 8.6849
BALB/cByJ m 9.2566 0.1318 9.5153 8.9978
BALB/cJ f 9.4473 0.214 9.8673 9.0272
BALB/cJ m 8.284 0.3175 8.9071 7.6609
BTBR T+ Itpr3tf/J f 8.266 0.2245 8.7066 7.8254
BTBR T+ Itpr3tf/J m 8.89 0.2245 9.3306 8.4494
BUB/BnJ f 8.9443 0.1897 9.3166 8.5719
BUB/BnJ m 9.11 0.2245 9.5506 8.6694
C3H/HeJ f 8.964 0.2245 9.4046 8.5234
C3H/HeJ m 9.334 0.2245 9.7746 8.8934
C57BL/10J f 9.851 0.1587 10.1625 9.5395
C57BL/10J m 10.0813 0.1833 10.4411 9.7216
C57BL/6J f 9.1855 0.214 9.6055 8.7654
C57BL/6J m 9.34 0.214 9.7601 8.9199
C57BLKS/J f 9.483 0.2245 9.9236 9.0424
C57BLKS/J m 9.034 0.2245 9.4746 8.5934
C57BR/cdJ f 9.815 0.2245 10.2556 9.3744
C57BR/cdJ m 10.0892 0.2049 10.4914 9.687
C57L/J f 9.9042 0.2049 10.3064 9.502
C57L/J m 10.394 0.1833 10.7537 10.0343
C58/J f 8.3782 0.214 8.7983 7.9581
C58/J m 8.9 0.2366 9.3644 8.4356
CAST/EiJ f 8.9108 0.2049 9.313 8.5086
CAST/EiJ m 8.5582 0.214 8.9783 8.1381
CBA/J f 9.2322 0.2366 9.6966 8.7678
CBA/J m 9.422 0.2245 9.8626 8.9814
CE/J f 8.9923 0.1969 9.3787 8.6059
CE/J m 9.8163 0.251 10.3088 9.3237
CZECHII/EiJ f 8.8055 0.214 9.2255 8.3854
CZECHII/EiJ m 8.9664 0.214 9.3864 8.5463
DBA/1J f 10.5929 0.1897 10.9652 10.2205
DBA/1J m 10.3955 0.214 10.8155 9.9754
DBA/2J f 9.8823 0.1969 10.2687 9.4959
DBA/2J m 10.016 0.2245 10.4566 9.5754
FVB/NJ f 9.0975 0.2049 9.4997 8.6953
FVB/NJ m 8.6175 0.2049 9.0197 8.2153
I/LnJ f 9.6569 0.1969 10.0433 9.2705
I/LnJ m 9.2707 0.1897 9.6431 8.8984
JF1/MsJ f 8.0275 0.2049 8.4297 7.6253
JF1/MsJ m 8.4556 0.1775 8.8039 8.1073
KK/HlJ f 9.4871 0.1897 9.8595 9.1148
KK/HlJ m 9.27 0.214 9.6901 8.8499
LP/J f 9.122 0.1833 9.4817 8.7623
LP/J m 9.303 0.2245 9.7436 8.8624
MA/MyJ f 8.3608 0.2049 8.763 7.9586
MA/MyJ m 9.1346 0.1969 9.521 8.7482
MOLF/EiJ f 8.2185 0.1969 8.6049 7.8321
MOLF/EiJ m 8.2187 0.1833 8.5784 7.8589
MSM/MsJ f 7.9591 0.214 8.3792 7.539
MSM/MsJ m 7.7855 0.214 8.2055 7.3654
NOD/ShiLtJ f 8.764 0.2245 9.2046 8.3234
NOD/ShiLtJ m 8.531 0.2245 8.9716 8.0904
NON/ShiLtJ f 9.429 0.2245 9.8696 8.9884
NON/ShiLtJ m 9.003 0.2245 9.4436 8.5624
NZB/BlNJ f 8.7233 0.2049 9.1255 8.3211
NZB/BlNJ m 9.2478 0.2366 9.7122 8.7834
NZW/LacJ f 8.7283 0.2049 9.1305 8.3261
NZW/LacJ m 8.736 0.2245 9.1766 8.2954
PERA/EiJ f 9.6373 0.214 10.0573 9.2172
PERA/EiJ m 9.08 0.251 9.5726 8.5874
PL/J f 9.6831 0.1775 10.0314 9.3348
PL/J m 9.445 0.2245 9.8856 9.0044
PWK/PhJ f 9.0469 0.1969 9.4333 8.6605
PWK/PhJ m 9.705 0.2049 10.1072 9.3028
RF/J f 9.5 0.2245 9.9406 9.0594
RF/J m 9.9869 0.1775 10.3352 9.6386
RIIIS/J f 9.1855 0.214 9.6055 8.7654
RIIIS/J m 9.405 0.1775 9.7533 9.0567
SEA/GnJ f 9.066 0.2245 9.5066 8.6254
SEA/GnJ m 8.9 0.2366 9.3644 8.4356
SJL/J f 9.32 0.251 9.8126 8.8274
SJL/J m 8.7157 0.1897 9.0881 8.3434
SM/J f 8.8736 0.214 9.2937 8.4536
SM/J m 8.757 0.2245 9.1976 8.3164
SPRET/EiJ f 9.4855 0.214 9.9055 9.0654
SPRET/EiJ m 10.2864 0.214 10.7064 9.8663
SWR/J f 8.8431 0.1969 9.2295 8.4567
SWR/J m 8.6255 0.214 9.0455 8.2054
WSB/EiJ f 8.6164 0.214 9.0364 8.1963
WSB/EiJ m 8.9556 0.2366 9.42 8.4911


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 9.6064 0.1319 9.8652 9.3475
A/J both 9.299 0.1587 9.6105 8.9875
AKR/J both 9.3531 0.1631 9.6732 9.033
BALB/cByJ both 9.1506 0.1129 9.3722 8.9291
BALB/cJ both 8.8656 0.1914 9.2414 8.4899
BTBR T+ Itpr3tf/J both 8.578 0.1587 8.8895 8.2665
BUB/BnJ both 9.0271 0.147 9.3156 8.7387
C3H/HeJ both 9.149 0.1587 9.4605 8.8375
C57BL/10J both 9.9662 0.1212 10.2041 9.7282
C57BL/6J both 9.2627 0.1514 9.5598 8.9657
C57BLKS/J both 9.2585 0.1587 9.57 8.947
C57BR/cdJ both 9.9521 0.152 10.2504 9.6538
C57L/J both 10.1491 0.1375 10.4189 9.8793
C58/J both 8.6391 0.1595 8.9522 8.326
CAST/EiJ both 8.7345 0.1482 9.0253 8.4437
CBA/J both 9.3271 0.1631 9.6472 9.007
CE/J both 9.4043 0.1595 9.7173 9.0913
CZECHII/EiJ both 8.8859 0.1514 9.1829 8.5889
DBA/1J both 10.4942 0.143 10.7748 10.2135
DBA/2J both 9.9492 0.1493 10.2422 9.6561
FVB/NJ both 8.8575 0.1449 9.1419 8.5731
I/LnJ both 9.4638 0.1367 9.7321 9.1955
JF1/MsJ both 8.2416 0.1356 8.5076 7.9755
KK/HlJ both 9.3786 0.143 9.6592 9.0979
LP/J both 9.2125 0.1449 9.4969 8.9281
MA/MyJ both 8.7477 0.1421 9.0266 8.4689
MOLF/EiJ both 8.2186 0.1345 8.4825 7.9546
MSM/MsJ both 7.8723 0.1514 8.1693 7.5752
NOD/ShiLtJ both 8.6475 0.1587 8.959 8.336
NON/ShiLtJ both 9.216 0.1587 9.5275 8.9045
NZB/BlNJ both 8.9856 0.1565 9.2927 8.6784
NZW/LacJ both 8.7322 0.152 9.0304 8.4339
PERA/EiJ both 9.3586 0.1649 9.6823 9.0349
PL/J both 9.5641 0.1431 9.8449 9.2832
PWK/PhJ both 9.376 0.1421 9.6548 9.0971
RF/J both 9.7434 0.1431 10.0243 9.4626
RIIIS/J both 9.2952 0.139 9.5681 9.0224
SEA/GnJ both 8.983 0.1631 9.3031 8.6629
SJL/J both 9.0179 0.1573 9.3266 8.7091
SM/J both 8.8153 0.1551 9.1197 8.5109
SPRET/EiJ both 9.8859 0.1514 10.1829 9.5889
SWR/J both 8.7343 0.1454 9.0196 8.4489
WSB/EiJ both 8.786 0.1595 9.0991 8.4729




  GWAS USING LINEAR MIXED MODELS