Project measure / variable:   Tordoff1   NH4Cl_pref300

ID, description, units MPD:6125   NH4Cl_pref300   preference for NH4Cl (ammonium chloride) solutions   [%]  concentration 300 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for NH4Cl (ammonium chloride) solutions concentration 300 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means25.3   %
Median of the strain means21.0   %
SD of the strain means± 11.8
Coefficient of variation (CV)0.467
Min–max range of strain means4.64   –   49.5   %
Mean sample size per strain11.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 43392.1342 1607.1161 6.5244 < 0.0001
Residuals 290 71434.3554 246.3254


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 41.5 8.79   12 2.54 0.212 24.3, 58.8 1.37
A/J m 33.8 20.6   12 5.93 0.608 7.7, 66.0 0.72
AKR/J m 20.7 21.7   11 6.53 1.05 3.0, 68.1 -0.39
BALB/cByJ m 18.8 14.5   11 4.36 0.769 5.8, 42.6 -0.55
BUB/BnJ m 19.8 12.2   7 4.61 0.616 6.4, 34.3 -0.46
C3H/HeJ m 18.3 6.73   12 1.94 0.367 8.0, 31.5 -0.59
C57BL/6J m 38.4 17.7   12 5.11 0.461 9.5, 63.8 1.11
C57L/J m 44.3 8.05   11 2.43 0.182 34.3, 59.4 1.61
CAST/EiJ m 21.4 12.5   12 3.61 0.584 2.3, 40.4 -0.33
CBA/J m 21.2 24.7   12 7.12 1.17 4.5, 81.5 -0.35
CE/J m 18.4 15.8   12 4.57 0.858 1.9, 51.3 -0.58
DBA/2J m 44.3 19.2   12 5.55 0.434 28.0, 96.2 1.61
FVB/NJ m 16.8 9.87   12 2.85 0.589 4.5, 31.7 -0.72
I/LnJ m 20.9 14.4   11 4.34 0.688 4.0, 43.4 -0.37
KK/HlJ m 14.7 9.64   6 3.94 0.657 1.9, 27.9 -0.9
LP/J m 49.5 27.6   12 7.97 0.558 11.9, 96.5 2.05
NOD/ShiLtJ m 33.1 16.3   12 4.7 0.493 14.1, 59.1 0.66
NZB/BlNJ m 43.7 8.14   11 2.45 0.186 32.9, 57.3 1.56
P/J m 7.49 6.02   12 1.74 0.804 1.5, 19.4 -1.51
PL/J m 33.1 15.1   12 4.35 0.456 16.1, 66.7 0.66
RBF/DnJ m 29.2 14.6   12 4.21 0.499 10.5, 64.1 0.33
RF/J m 20.8 17.2   11 5.18 0.824 4.5, 47.6 -0.38
RIIIS/J m 19.5 13.1   12 3.79 0.675 3.8, 48.8 -0.49
SEA/GnJ m 13.8 17.0   12 4.9 1.23 1.1, 56.3 -0.97
SJL/J m 15.7 12.6   11 3.8 0.803 4.9, 40.4 -0.81
SM/J m 22.4 22.1   12 6.39 0.986 1.2, 61.6 -0.24
SPRET/EiJ m 4.64 2.14   12 0.618 0.462 2.0, 10.3 -1.75
SWR/J m 21.4 15.3   12 4.42 0.717 2.0, 50.0 -0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 41.5417 4.5307 50.4589 32.6245
A/J m 33.825 4.5307 42.7422 24.9078
AKR/J m 20.6909 4.7321 30.0046 11.3772
BALB/cByJ m 18.8 4.7321 28.1137 9.4863
BUB/BnJ m 19.8286 5.9321 31.5039 8.1532
C3H/HeJ m 18.3417 4.5307 27.2589 9.4245
C57BL/6J m 38.3917 4.5307 47.3089 29.4745
C57L/J m 44.2545 4.7321 53.5683 34.9408
CAST/EiJ m 21.4083 4.5307 30.3255 12.4911
CBA/J m 21.1583 4.5307 30.0755 12.2411
CE/J m 18.45 4.5307 27.3672 9.5328
DBA/2J m 44.3083 4.5307 53.2255 35.3911
FVB/NJ m 16.7667 4.5307 25.6839 7.8495
I/LnJ m 20.9364 4.7321 30.2501 11.6227
KK/HlJ m 14.6833 6.4074 27.2942 2.0725
LP/J m 49.4833 4.5307 58.4005 40.5661
NOD/ShiLtJ m 33.0667 4.5307 41.9839 24.1495
NZB/BlNJ m 43.7364 4.7321 53.0501 34.4227
P/J m 7.4917 4.5307 16.4089 0.0
PL/J m 33.0917 4.5307 42.0089 24.1745
RBF/DnJ m 29.2417 4.5307 38.1589 20.3245
RF/J m 20.8455 4.7321 30.1592 11.5317
RIIIS/J m 19.4583 4.5307 28.3755 10.5411
SEA/GnJ m 13.825 4.5307 22.7422 4.9078
SJL/J m 15.6909 4.7321 25.0046 6.3772
SM/J m 22.4333 4.5307 31.3505 13.5161
SPRET/EiJ m 4.6417 4.5307 13.5589 0.0
SWR/J m 21.3833 4.5307 30.3005 12.4661




  GWAS USING LINEAR MIXED MODELS