Project measure / variable:   Schoenrock1   OF_center_ME

ID, description, units MPD:61228   OF_center_ME   percentage of time in center of arena, 10 min test   [%]  methyl-enriched diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time in center of arena, 10 min test methyl-enriched diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means7.46   %
Median of the strain means7.12   %
SD of the strain means± 4.32
Coefficient of variation (CV)0.579
Min–max range of strain means1.24   –   18.6   %
Mean sample size per strain9.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 2247.7529 132.2208 5.9383 < 0.0001
Residuals 155 3451.1767 22.2657


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 4.72 4.27   11 1.29 0.904 0.42, 15.0 -0.63
RIX:CC(003 x 014) f 7.43 6.07   3 3.51 0.817 1.9, 13.9 -0.01
RIX:CC(004 x 017) f 13.9 5.52   6 2.25 0.396 6.88, 23.9 1.49
RIX:CC(005 x 040) f 8.06 5.25   24 1.07 0.652 0.5, 18.7 0.14
RIX:CC(006 x 026) f 6.21 1.16   5 0.519 0.187 4.3, 7.23 -0.29
RIX:CC(011 x 001) f 4.55 3.21   12 0.925 0.704 0.02, 12.0 -0.67
RIX:CC(014 x 003) f 3.06 2.26   4 1.13 0.74 0.6, 6.08 -1.02
RIX:CC(017 x 004) f 18.6 8.86   2   6.26 0.477 12.3, 24.9 2.58
RIX:CC(023 x 047) f 7.94 2.46   9 0.819 0.309 5.03, 12.3 0.11
RIX:CC(026 x 006) f 5.97 2.7   5 1.21 0.452 3.02, 9.7 -0.34
RIX:CC(032 x 042) f 9.0 8.46   19 1.94 0.94 0.38, 38.8 0.36
RIX:CC(035 x 062) f 9.34 1.82   2   1.29 0.195 8.05, 10.6 0.44
RIX:CC(040 x 005) f 6.82 5.27   15 1.36 0.774 0.33, 16.8 -0.15
RIX:CC(041 x 051) f 1.24 1.04   24 0.213 0.84 0.13, 4.4 -1.44
RIX:CC(042 x 032) f 11.0 6.2   9 2.07 0.561 0.47, 18.5 0.82
RIX:CC(047 x 023) f 4.37 1.88   4 0.942 0.431 1.95, 6.55 -0.71
RIX:CC(051 x 041) f 1.49 1.59   12 0.458 1.06 0.12, 5.85 -1.38
RIX:CC(062 x 035) f 10.5 3.32   7 1.26 0.317 5.9, 14.4 0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 4.72 1.4227 7.5304 1.9096
RIX:CC(003 x 014) f 7.4333 2.7243 12.8149 2.0518
RIX:CC(004 x 017) f 13.93 1.9264 17.7353 10.1247
RIX:CC(005 x 040) f 8.0558 0.9632 9.9585 6.1532
RIX:CC(006 x 026) f 6.21 2.1102 10.3785 2.0415
RIX:CC(011 x 001) f 4.5517 1.3622 7.2425 1.8609
RIX:CC(014 x 003) f 3.0575 2.3593 7.7181 0.0
RIX:CC(017 x 004) f 18.585 3.3366 25.1761 11.9939
RIX:CC(023 x 047) f 7.9389 1.5729 11.0459 4.8318
RIX:CC(026 x 006) f 5.972 2.1102 10.1405 1.8035
RIX:CC(032 x 042) f 9.0 1.0825 11.1384 6.8616
RIX:CC(035 x 062) f 9.34 3.3366 15.9311 2.7489
RIX:CC(040 x 005) f 6.8153 1.2184 9.222 4.4086
RIX:CC(041 x 051) f 1.2429 0.9632 3.1456 0.0
RIX:CC(042 x 032) f 11.05 1.5729 14.1571 7.9429
RIX:CC(047 x 023) f 4.37 2.3593 9.0306 0.0
RIX:CC(051 x 041) f 1.4925 1.3622 4.1833 0.0
RIX:CC(062 x 035) f 10.4771 1.7835 14.0002 6.9541




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA