Project measure / variable:   Tordoff1   NH4Cl_age

ID, description, units MPD:6120   NH4Cl_age   age at start of NH4Cl test (local parameter)   [d]  
Data set, strains Tordoff1   inbred   28 strains     sex: m
Procedure colony observation
Ontology mappings


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  STRAIN COMPARISON PLOT
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Tordoff1 - age at start of NH4Cl test (local parameter)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means90.4   d
Median of the strain means93.0   d
SD of the strain means± 7.22
Coefficient of variation (CV)0.0798
Min–max range of strain means73.2   –   107   d
Mean sample size per strain11.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 15180.4414 562.2386 20.3558 < 0.0001
Residuals 296 8175.6667 27.6205


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
A/J m 100.0 0.0   12 0.0 0.0 100.0, 100.0 1.32
AKR/J m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
BALB/cByJ m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
BUB/BnJ m 74.0 10.6   7 4.0 0.143 56.0, 84.0 -2.28
C3H/HeJ m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
C57BL/6J m 91.0 0.0   12 0.0 0.0 91.0, 91.0 0.08
C57L/J m 91.0 0.0   12 0.0 0.0 91.0, 91.0 0.08
CAST/EiJ m 84.6 9.18   12 2.65 0.109 70.0, 91.0 -0.81
CBA/J m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
CE/J m 82.5 10.5   12 3.04 0.128 70.0, 98.0 -1.1
DBA/2J m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
FVB/NJ m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
I/LnJ m 84.0 5.97   12 1.72 0.0711 77.0, 91.0 -0.89
KK/HlJ m 98.0 0.0   6 0.0 0.0 98.0, 98.0 1.05
LP/J m 93.6 5.55   12 1.6 0.0593 86.0, 100.0 0.44
NOD/ShiLtJ m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
NZB/BlNJ m 91.0 0.0   12 0.0 0.0 91.0, 91.0 0.08
P/J m 91.2 7.39   12 2.13 0.081 79.0, 100.0 0.1
PL/J m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
RBF/DnJ m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
RF/J m 79.0 11.9   12 3.45 0.151 58.0, 93.0 -1.59
RIIIS/J m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35
SEA/GnJ m 107.0 10.3   12 2.98 0.0966 93.0, 114.0 2.29
SJL/J m 93.0 0.0   11 0.0 0.0 93.0, 93.0 0.35
SM/J m 83.4 8.68   12 2.51 0.104 70.0, 91.0 -0.98
SPRET/EiJ m 73.2 6.41   12 1.85 0.0876 65.0, 79.0 -2.39
SWR/J m 93.0 0.0   12 0.0 0.0 93.0, 93.0 0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 93.0 1.5171 95.9857 90.0143
A/J m 100.0 1.5171 102.9857 97.0143
AKR/J m 93.0 1.5171 95.9857 90.0143
BALB/cByJ m 93.0 1.5171 95.9857 90.0143
BUB/BnJ m 74.0 1.9864 77.9093 70.0907
C3H/HeJ m 93.0 1.5171 95.9857 90.0143
C57BL/6J m 91.0 1.5171 93.9857 88.0143
C57L/J m 91.0 1.5171 93.9857 88.0143
CAST/EiJ m 84.5833 1.5171 87.5691 81.5976
CBA/J m 93.0 1.5171 95.9857 90.0143
CE/J m 82.5 1.5171 85.4857 79.5143
DBA/2J m 93.0 1.5171 95.9857 90.0143
FVB/NJ m 93.0 1.5171 95.9857 90.0143
I/LnJ m 84.0 1.5171 86.9857 81.0143
KK/HlJ m 98.0 2.1456 102.2225 93.7775
LP/J m 93.5833 1.5171 96.5691 90.5976
NOD/ShiLtJ m 93.0 1.5171 95.9857 90.0143
NZB/BlNJ m 91.0 1.5171 93.9857 88.0143
P/J m 91.25 1.5171 94.2357 88.2643
PL/J m 93.0 1.5171 95.9857 90.0143
RBF/DnJ m 93.0 1.5171 95.9857 90.0143
RF/J m 79.0 1.5171 81.9857 76.0143
RIIIS/J m 93.0 1.5171 95.9857 90.0143
SEA/GnJ m 107.0 1.5171 109.9857 104.0143
SJL/J m 93.0 1.5846 96.1185 89.8815
SM/J m 83.4167 1.5171 86.4024 80.4309
SPRET/EiJ m 73.1667 1.5171 76.1524 70.1809
SWR/J m 93.0 1.5171 95.9857 90.0143




  GWAS USING LINEAR MIXED MODELS