Project measure / variable:   GMC18   bw

ID, description, units MPD:56701   bw   body weight   [g]  
Data set, strains GMC18   inbred w/CC8   8 strains     sex: both     age: 17-18wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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GMC18 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains7 strains
Mean of the strain means23.9   g 29.7   g
Median of the strain means21.9   g 27.7   g
SD of the strain means± 12.0 ± 12.7
Coefficient of variation (CV)0.503 0.428
Min–max range of strain means14.2   –   52.4   g 18.1   –   55.7   g
Mean sample size per strain12.0   mice 13.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1389.5884 1389.5884 154.0072 < 0.0001
strain 6 25291.5401 4215.2567 467.1742 < 0.0001
sex:strain 6 164.2824 27.3804 3.0346 0.0076
Residuals 171 1542.9126 9.0229


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 22.7 1.7   16 0.424 0.0749 19.0, 25.7 -0.1
129S1/SvImJ m 27.7 2.89   16 0.723 0.105 24.6, 33.7 -0.16
A/J f 21.2 1.3   16 0.324 0.0613 18.3, 23.3 -0.23
A/J m 25.4 1.44   16 0.36 0.0567 23.0, 28.4 -0.34
C57BL/6J f 22.5 1.46   16 0.366 0.065 20.8, 25.2 -0.12
C57BL/6J m 30.6 1.57   16 0.393 0.0515 28.3, 33.0 0.07
CAST/EiJ f 14.2 1.21   9 0.404 0.0851 12.8, 16.2 -0.81
CAST/EiJ m 18.1 1.16   7 0.439 0.0643 15.9, 19.6 -0.91
NOD/ShiLtJ f 24.5 2.46   18 0.581 0.1 18.1, 27.9 0.05
NOD/ShiLtJ m 31.8 2.23   16 0.557 0.0701 29.6, 36.6 0.17
NZO/HlLtJ f 52.4 3.83   16 0.958 0.0732 45.3, 60.3 2.37
NZO/HlLtJ m 55.7 7.38   16 1.85 0.133 38.3, 65.0 2.05
PWK/PhJ f 17.3 0.566   2   0.4 0.0327 16.9, 17.7 -0.55
WSB/EiJ f 16.6 1.96   3 1.13 0.118 14.4, 18.2 -0.61
WSB/EiJ m 18.4 1.45   4 0.725 0.0788 16.3, 19.5 -0.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 22.65 0.751 24.1323 21.1677
129S1/SvImJ m 27.65 0.751 29.1323 26.1677
A/J f 21.1562 0.751 22.6386 19.6739
A/J m 25.4 0.751 26.8823 23.9177
C57BL/6J f 22.5125 0.751 23.9948 21.0302
C57BL/6J m 30.55 0.751 32.0323 29.0677
CAST/EiJ f 14.2333 1.0013 16.2098 12.2569
CAST/EiJ m 18.0571 1.1353 20.2982 15.8161
NOD/ShiLtJ f 24.5167 0.708 25.9142 23.1191
NOD/ShiLtJ m 31.7875 0.751 33.2698 30.3052
NZO/HlLtJ f 52.375 0.751 53.8573 50.8927
NZO/HlLtJ m 55.6562 0.751 57.1386 54.1739
WSB/EiJ f 16.5667 1.7343 19.99 13.1434
WSB/EiJ m 18.4 1.5019 21.3647 15.4353


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.15 0.531 26.1982 24.1018
A/J both 23.2781 0.531 24.3263 22.23
C57BL/6J both 26.5312 0.531 27.5794 25.4831
CAST/EiJ both 16.1452 0.7569 17.6393 14.6512
NOD/ShiLtJ both 28.1521 0.516 29.1707 27.1334
NZO/HlLtJ both 54.0156 0.531 55.0638 52.9675
WSB/EiJ both 17.4833 1.1471 19.7476 15.219




  GWAS USING LINEAR MIXED MODELS