Project measure / variable:   GMC15   HGB

ID, description, units MPD:56416   HGB   hemoglobin (HGB)   [g/dL]  
Data set, strains GMC15   inbred w/CC8   8 strains     sex: both     age: 20-21wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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GMC15 - hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means17.2   g/dL 17.5   g/dL
Median of the strain means16.8   g/dL 17.4   g/dL
SD of the strain means± 1.14 ± 1.53
Coefficient of variation (CV)0.0661 0.0872
Min–max range of strain means15.8   –   18.8   g/dL 15.5   –   20.5   g/dL
Mean sample size per strain10.2   mice 11.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.7108 4.7108 1.9532 0.1642
strain 7 228.078 32.5826 13.5092 < 0.0001
sex:strain 7 57.1983 8.1712 3.3879 0.0021
Residuals 161 388.313 2.4119


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 18.8 2.18   10 0.691 0.116 15.9, 24.3 1.43
129S1/SvImJ m 18.3 1.02   12 0.296 0.0561 16.4, 19.9 0.52
A/J f 16.1 0.713   10 0.225 0.0442 15.0, 17.2 -0.95
A/J m 15.5 0.739   12 0.213 0.0477 13.9, 16.5 -1.31
C57BL/6J f 16.6 1.03   10 0.327 0.0623 15.4, 18.2 -0.51
C57BL/6J m 16.5 1.22   12 0.353 0.074 15.0, 19.4 -0.66
CAST/EiJ f 16.9 0.541   12 0.156 0.032 15.8, 17.5 -0.24
CAST/EiJ m 17.7 0.945   12 0.273 0.0534 16.4, 19.8 0.13
NOD/ShiLtJ f 16.6 0.829   10 0.262 0.0501 14.9, 17.7 -0.51
NOD/ShiLtJ m 18.0 1.46   12 0.422 0.0812 16.2, 20.5 0.33
NZO/HlLtJ f 18.1 1.04   10 0.33 0.0576 15.9, 19.6 0.81
NZO/HlLtJ m 20.5 3.92   12 1.13 0.191 15.4, 28.0 1.97
PWK/PhJ f 18.5 1.78   10 0.562 0.0957 17.1, 23.0 1.17
PWK/PhJ m 17.1 1.87   11 0.563 0.109 13.0, 19.3 -0.26
WSB/EiJ f 15.8 0.841   10 0.266 0.0532 13.7, 17.0 -1.21
WSB/EiJ m 16.4 0.755   12 0.218 0.046 15.1, 17.6 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 18.76 0.4911 19.7298 17.7902
129S1/SvImJ m 18.25 0.4483 19.1353 17.3647
A/J f 16.12 0.4911 17.0898 15.1502
A/J m 15.475 0.4483 16.3603 14.5897
C57BL/6J f 16.6 0.4911 17.5698 15.6302
C57BL/6J m 16.5167 0.4483 17.402 15.6313
CAST/EiJ f 16.9 0.4483 17.7853 16.0147
CAST/EiJ m 17.7 0.4483 18.5853 16.8147
NOD/ShiLtJ f 16.55 0.4911 17.5198 15.5802
NOD/ShiLtJ m 17.9917 0.4483 18.877 17.1063
NZO/HlLtJ f 18.13 0.4911 19.0998 17.1602
NZO/HlLtJ m 20.4917 0.4483 21.377 19.6063
PWK/PhJ f 18.55 0.4911 19.5198 17.5802
PWK/PhJ m 17.1182 0.4683 18.0429 16.1935
WSB/EiJ f 15.81 0.4911 16.7798 14.8402
WSB/EiJ m 16.4083 0.4483 17.2937 15.523


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 18.505 0.3325 19.1616 17.8484
A/J both 15.7975 0.3325 16.4541 15.1409
C57BL/6J both 16.5583 0.3325 17.2149 15.9017
CAST/EiJ both 17.3 0.317 17.926 16.674
NOD/ShiLtJ both 17.2708 0.3325 17.9274 16.6142
NZO/HlLtJ both 19.3108 0.3325 19.9674 18.6542
PWK/PhJ both 17.8341 0.3393 18.5041 17.1641
WSB/EiJ both 16.1092 0.3325 16.7658 15.4526




  GWAS USING LINEAR MIXED MODELS