Project measure / variable:   GMC11   bw_after_fast

ID, description, units MPD:56002   bw_after_fast   body weight   [g]  after 16h fast  
Data set, strains GMC11   inbred w/CC8   6 strains     sex: both     age: 13-14wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC11 - body weight after 16h fast



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested6 strains6 strains
Mean of the strain means23.2   g 27.8   g
Median of the strain means19.7   g 25.1   g
SD of the strain means± 10.4 ± 11.4
Coefficient of variation (CV)0.449 0.408
Min–max range of strain means14.9   –   43.9   g 17.1   –   49.8   g
Mean sample size per strain14.0   mice 15.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 606.4132 606.4132 125.5099 < 0.0001
strain 5 18180.4081 3636.0816 752.5629 < 0.0001
sex:strain 5 59.5413 11.9083 2.4647 0.0349
Residuals 165 797.2137 4.8316


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 19.8 1.34   16 0.334 0.0675 17.4, 22.0 -0.32
129S1/SvImJ m 24.3 2.6   16 0.651 0.107 21.5, 29.4 -0.31
A/J f 18.9 0.844   15 0.218 0.0447 17.5, 20.6 -0.41
A/J m 22.3 0.94   16 0.235 0.0421 21.1, 24.1 -0.48
C57BL/6J f 19.6 3.03   16 0.757 0.154 17.2, 30.1 -0.34
C57BL/6J m 26.0 1.39   16 0.348 0.0534 24.1, 28.2 -0.16
NOD/ShiLtJ f 21.9 1.21   18 0.284 0.0552 19.6, 23.9 -0.12
NOD/ShiLtJ m 27.3 2.03   16 0.509 0.0744 24.5, 31.1 -0.04
NZO/HlLtJ f 43.9 3.23   17 0.784 0.0736 37.5, 50.4 1.99
NZO/HlLtJ m 49.8 3.45   17 0.836 0.0692 44.4, 54.9 1.94
PWK/PhJ f 14.9 0.0   2   0.0 0.0 14.9, 14.9 -0.79
PWK/PhJ m 17.1 1.78   12 0.515 0.104 14.7, 20.2 -0.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.8 0.5495 20.885 18.715
129S1/SvImJ m 24.3 0.5495 25.385 23.215
A/J f 18.88 0.5675 20.0006 17.7594
A/J m 22.3 0.5495 23.385 21.215
C57BL/6J f 19.5938 0.5495 20.6788 18.5087
C57BL/6J m 26.0313 0.5495 27.1163 24.9462
NOD/ShiLtJ f 21.8667 0.5181 22.8896 20.8437
NOD/ShiLtJ m 27.3375 0.5495 28.4225 26.2525
NZO/HlLtJ f 43.9412 0.5331 44.9938 42.8886
NZO/HlLtJ m 49.8235 0.5331 50.8761 48.7709
PWK/PhJ f 14.9 1.5543 17.9688 11.8312
PWK/PhJ m 17.1167 0.6345 18.3695 15.8638


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 22.05 0.3886 22.8172 21.2828
A/J both 20.59 0.395 21.3699 19.8101
C57BL/6J both 22.8125 0.3886 23.5797 22.0453
NOD/ShiLtJ both 24.6021 0.3776 25.3477 23.8565
NZO/HlLtJ both 46.8824 0.377 47.6267 46.138
PWK/PhJ both 16.0083 0.8394 17.6657 14.351




  GWAS USING LINEAR MIXED MODELS