Project measure / variable:   GMC07   bw

ID, description, units MPD:55601   bw   body weight   [g]  
Data set, strains GMC07   inbred w/CC8   8 strains     sex: both     age: 11-12wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC07 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means21.7   g 26.6   g
Median of the strain means20.6   g 25.1   g
SD of the strain means± 9.85 ± 11.5
Coefficient of variation (CV)0.454 0.431
Min–max range of strain means13.2   –   44.1   g 16.7   –   51.8   g
Mean sample size per strain17.5   mice 16.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1713.9662 1713.9662 408.3939 < 0.0001
strain 7 27421.4764 3917.3538 933.4043 < 0.0001
sex:strain 7 254.1931 36.3133 8.6525 < 0.0001
Residuals 259 1086.983 4.1968


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 21.0 1.15   16 0.288 0.0549 18.5, 23.0 -0.07
129S1/SvImJ m 26.2 2.77   16 0.691 0.106 22.8, 31.8 -0.03
A/J f 20.2 1.27   16 0.316 0.0625 16.8, 21.8 -0.15
A/J m 24.0 1.17   16 0.293 0.0489 21.8, 26.3 -0.23
C57BL/6J f 21.0 1.12   16 0.28 0.0532 19.3, 23.6 -0.07
C57BL/6J m 28.7 1.57   16 0.393 0.0547 26.5, 31.1 0.18
CAST/EiJ f 13.2 0.728   19 0.167 0.0553 12.0, 14.8 -0.86
CAST/EiJ m 16.8 0.864   17 0.209 0.0515 15.0, 18.7 -0.86
NOD/ShiLtJ f 24.2 1.49   18 0.352 0.0617 21.2, 26.4 0.26
NOD/ShiLtJ m 30.1 2.3   16 0.575 0.0764 26.2, 34.5 0.31
NZO/HlLtJ f 44.1 4.25   17 1.03 0.0964 33.9, 51.9 2.28
NZO/HlLtJ m 51.8 3.51   17 0.851 0.0677 46.5, 56.6 2.2
PWK/PhJ f 15.7 1.84   20 0.411 0.117 13.0, 20.5 -0.61
PWK/PhJ m 18.5 1.79   21 0.391 0.0971 15.2, 21.1 -0.71
WSB/EiJ f 14.0 2.14   18 0.505 0.153 10.9, 18.8 -0.78
WSB/EiJ m 16.7 1.17   16 0.292 0.07 14.1, 19.0 -0.86


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 20.9687 0.5122 21.9773 19.9602
129S1/SvImJ m 26.2062 0.5122 27.2148 25.1977
A/J f 20.25 0.5122 21.2585 19.2415
A/J m 23.9562 0.5122 24.9648 22.9477
C57BL/6J f 21.0375 0.5122 22.046 20.029
C57BL/6J m 28.7312 0.5122 29.7398 27.7227
CAST/EiJ f 13.1684 0.47 14.0939 12.2429
CAST/EiJ m 16.7765 0.4969 17.7549 15.7981
NOD/ShiLtJ f 24.2389 0.4829 25.1897 23.288
NOD/ShiLtJ m 30.1125 0.5122 31.121 29.104
NZO/HlLtJ f 44.1 0.4969 45.0784 43.1216
NZO/HlLtJ m 51.8412 0.4969 52.8196 50.8628
PWK/PhJ f 15.7 0.4581 16.602 14.798
PWK/PhJ m 18.4524 0.447 19.3327 17.5721
WSB/EiJ f 13.9833 0.4829 14.9342 13.0325
WSB/EiJ m 16.6875 0.5122 17.696 15.679


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.5875 0.3621 24.3006 22.8744
A/J both 22.1031 0.3621 22.8163 21.39
C57BL/6J both 24.8844 0.3621 25.5975 24.1712
CAST/EiJ both 14.9724 0.342 15.6458 14.2991
NOD/ShiLtJ both 27.1757 0.3519 27.8687 26.4827
NZO/HlLtJ both 47.9706 0.3513 48.6624 47.2788
PWK/PhJ both 17.0762 0.32 17.7064 16.446
WSB/EiJ both 15.3354 0.3519 16.0285 14.6424




  GWAS USING LINEAR MIXED MODELS