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Project measure / variable:   GMC06   bw_before_fast

ID, description, units MPD:55501   bw_before_fast   body weight   [g]  before fast  
Data set, strains GMC06   inbred w/CC8   8 strains     sex: both     age: 10-11wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC06 - body weight before fast



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means21.2   g 26.0   g
Median of the strain means20.1   g 25.0   g
SD of the strain means± 9.30 ± 10.8
Coefficient of variation (CV)0.439 0.414
Min–max range of strain means12.9   –   42.6   g 16.2   –   49.7   g
Mean sample size per strain12.6   mice 12.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1504.4385 1504.4385 360.043 < 0.0001
strain 7 17609.689 2515.6699 602.0514 < 0.0001
sex:strain 7 147.4099 21.0586 5.0397 < 0.0001
Residuals 181 756.3079 4.1785


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 20.7 1.12   16 0.279 0.054 18.3, 22.8 -0.05
129S1/SvImJ m 26.4 2.69   16 0.673 0.102 23.1, 32.2 0.03
A/J f 20.0 1.17   16 0.293 0.0585 17.9, 22.0 -0.13
A/J m 23.6 1.05   16 0.262 0.0445 22.2, 25.5 -0.23
C57BL/6J f 20.2 1.08   16 0.27 0.0535 18.5, 22.1 -0.11
C57BL/6J m 27.7 1.52   16 0.38 0.0548 25.4, 30.6 0.16
CAST/EiJ f 12.9 0.568   6 0.232 0.0441 12.3, 13.9 -0.89
CAST/EiJ m 16.2 0.939   4 0.47 0.0581 14.8, 16.9 -0.91
NOD/ShiLtJ f 22.9 1.39   18 0.328 0.0607 20.2, 25.3 0.18
NOD/ShiLtJ m 29.1 2.29   16 0.572 0.0785 26.0, 33.5 0.29
NZO/HlLtJ f 42.6 4.07   17 0.987 0.0956 35.3, 51.5 2.3
NZO/HlLtJ m 49.7 3.14   16 0.785 0.0632 45.1, 54.6 2.2
PWK/PhJ f 15.1 0.684   8 0.242 0.0452 13.9, 15.9 -0.66
PWK/PhJ m 18.3 0.926   8 0.327 0.0505 16.7, 19.3 -0.72
WSB/EiJ f 15.2 0.603   4 0.301 0.0395 14.4, 15.8 -0.65
WSB/EiJ m 17.2 0.443   4 0.221 0.0258 16.7, 17.6 -0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 20.6938 0.511 21.7021 19.6854
129S1/SvImJ m 26.3938 0.511 27.4021 25.3854
A/J f 20.0375 0.511 21.0459 19.0291
A/J m 23.5688 0.511 24.5771 22.5604
C57BL/6J f 20.2063 0.511 21.2146 19.1979
C57BL/6J m 27.7188 0.511 28.7271 26.7104
CAST/EiJ f 12.8667 0.8345 14.5133 11.22
CAST/EiJ m 16.175 1.0221 18.1917 14.1583
NOD/ShiLtJ f 22.9389 0.4818 23.8896 21.9882
NOD/ShiLtJ m 29.1375 0.511 30.1459 28.1291
NZO/HlLtJ f 42.5588 0.4958 43.5371 41.5806
NZO/HlLtJ m 49.675 0.511 50.6834 48.6666
PWK/PhJ f 15.125 0.7227 16.551 13.699
PWK/PhJ m 18.3375 0.7227 19.7635 16.9115
WSB/EiJ f 15.25 1.0221 17.2667 13.2333
WSB/EiJ m 17.175 1.0221 19.1917 15.1583


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.5438 0.3614 24.2568 22.8307
A/J both 21.8031 0.3614 22.5161 21.0901
C57BL/6J both 23.9625 0.3614 24.6755 23.2495
CAST/EiJ both 14.5208 0.6597 15.8226 13.2191
NOD/ShiLtJ both 26.0382 0.3512 26.7311 25.3453
NZO/HlLtJ both 46.1169 0.356 46.8194 45.4145
PWK/PhJ both 16.7313 0.511 17.7396 15.7229
WSB/EiJ both 16.2125 0.7227 17.6385 14.7865




  GWAS USING LINEAR MIXED MODELS