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Project measure / variable:   Shin1   OFL_memory

ID, description, units MPD:54502   OFL_memory   percent time freezing during 4 min of contextual exposure (empathic fear)   [%]  
Data set, strains Shin1   inbred   11 strains     sex: m     age: 12-14wks
Procedure observational fear learning test
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  STRAIN COMPARISON PLOT
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Shin1 - percent time freezing during 4 min of contextual exposure (empathic fear)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means6.81   %
Median of the strain means1.72   %
SD of the strain means± 8.10
Coefficient of variation (CV)1.19
Min–max range of strain means0.418   –   24.9   %
Mean sample size per strain13.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 8843.205 884.3205 19.9818 < 0.0001
Residuals 134 5930.3522 44.2564


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 24.9 13.6   14 3.64 0.546 5.51, 52.2 2.23
129S4/SvJaeJ m 12.1 5.07   16 1.27 0.419 3.75, 19.6 0.65
AKR/J m 1.72 1.01   15 0.261 0.588 -0.63
BALB/cByJ m 0.418 0.758   14 0.203 1.81 -0.79
BTBR T+ Itpr3tf/J m 6.14 3.74   14 0.999 0.609 0.11, 11.5 -0.08
C3H/HeJ m 0.844 0.927   9 0.309 1.1 -0.74
C57BL/6J m 10.5 5.22   16 1.31 0.496 2.14, 21.5 0.46
C57BL/6NTac m 15.7 11.8   19 2.7 0.748 2.21, 43.7 1.1
DBA/2J m 0.644 0.504   9 0.168 0.782 -0.76
FVB/NJ m 0.976 1.29   9 0.429 1.32 -0.72
NOD/ShiLtJ m 1.0 1.3   10 0.41 1.29 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 24.9264 1.778 28.4429 21.4099
129S4/SvJaeJ m 12.1175 1.6631 15.4069 8.8281
AKR/J m 1.7213 1.7177 5.1186 0.0
BALB/cByJ m 0.4179 1.778 3.9344 0.0
BTBR T+ Itpr3tf/J m 6.1386 1.778 9.6551 2.6221
C3H/HeJ m 0.8444 2.2175 5.2303 0.0
C57BL/6J m 10.5262 1.6631 13.8156 7.2369
C57BL/6NTac m 15.7211 1.5262 18.7396 12.7025
DBA/2J m 0.6444 2.2175 5.0303 0.0
FVB/NJ m 0.9756 2.2175 5.3614 0.0
NOD/ShiLtJ m 1.003 2.1037 5.1638 0.0




  GWAS USING LINEAR MIXED MODELS