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Project measure / variable:   Korstanje2   pct_MME_M06

ID, description, units MPD:51001   pct_MME_M06   percentage of glomeruli exhibiting mesangial matrix expansion   [%]  at age 6mo  
Data set, strains Korstanje2   inbred   7 strains     sex: m     age: 26wks
Procedure histopathology
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  STRAIN COMPARISON PLOT
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Korstanje2 - percentage of glomeruli exhibiting mesangial matrix expansion at age 6mo



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested7 strains
Mean of the strain means8.58   %
Median of the strain means7.00   %
SD of the strain means± 6.11
Coefficient of variation (CV)0.713
Min–max range of strain means1.33   –   16.7   %
Mean sample size per strain6.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 6 1338.2857 223.0476 5.1631 0.0007
Residuals 35 1512.0 43.2


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
AKR/J m 16.7 10.4   6 4.25 0.624 6.0, 34.0 1.33
C57BR/cdJ m 4.33 4.8   6 1.96 1.11 -0.7
KK/HlJ m 7.0 6.03   6 2.46 0.862 -0.26
NZO/HlLtJ m 9.67 6.62   6 2.7 0.685 4.0, 20.0 0.18
NZW/LacJ m 4.33 4.8   6 1.96 1.11 -0.7
P/J m 1.33 1.03   6 0.422 0.775 -1.19
SM/J m 16.7 8.16   6 3.33 0.49 6.0, 26.0 1.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AKR/J m 16.6667 2.6833 22.114 11.2193
C57BR/cdJ m 4.3333 2.6833 9.7807 0.0
KK/HlJ m 7.0 2.6833 12.4474 1.5526
NZO/HlLtJ m 9.6667 2.6833 15.114 4.2193
NZW/LacJ m 4.3333 2.6833 9.7807 0.0
P/J m 1.3333 2.6833 6.7807 0.0
SM/J m 16.6667 2.6833 22.114 11.2193




  GWAS USING LINEAR MIXED MODELS