Project measure / variable:   HMDPpheno10   glycylleucine

ID, description, units MPD:50525   glycylleucine   glycylleucine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno10 - glycylleucine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means216620   None
Median of the strain means193696   None
SD of the strain means± 115921
Coefficient of variation (CV)0.535
Min–max range of strain means50678   –   643802   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1051201688797.3 50057223276.0618 3.9046 0.0002
Residuals 34 435880383837.942 12820011289.3512


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 190165.0 0.0   1   0.0 0.0 190165.0, 190165.0 -0.23
A/J m 184364.0 152399.0   2   107762.0 0.827 76601.0, 292126.0 -0.28
AKR/J m 97500.0 0.0   1   0.0 0.0 97500.0, 97500.0 -1.03
AXB10/PgnJ m 247067.0 0.0   1   0.0 0.0 247067.0, 247067.0 0.26
AXB12/PgnJ m 193591.0 0.0   1   0.0 0.0 193591.0, 193591.0 -0.2
AXB13/PgnJ m 256304.0 0.0   1   0.0 0.0 256304.0, 256304.0 0.34
AXB15/PgnJ m 117860.0 0.0   1   0.0 0.0 117860.0, 117860.0 -0.85
AXB19a/PgnJ m 219793.0 0.0   1   0.0 0.0 219793.0, 219793.0 0.03
AXB19b/PgnJ m 245480.0 51684.0   2   36546.0 0.211 208934.0, 282027.0 0.25
AXB19/PgnJ m 170675.0 0.0   1   0.0 0.0 170675.0, 170675.0 -0.4
AXB1/PgnJ m 118067.0 0.0   1   0.0 0.0 118067.0, 118067.0 -0.85
AXB23/PgnJ m 199109.0 0.0   1   0.0 0.0 199109.0, 199109.0 -0.15
AXB24/PgnJ m 200612.0 12910.0   2   9129.0 0.0644 191483.0, 209740.0 -0.14
AXB2/PgnJ m 116062.0 0.0   1   0.0 0.0 116062.0, 116062.0 -0.87
AXB4/PgnJ m 296125.0 0.0   1   0.0 0.0 296125.0, 296125.0 0.69
AXB5/PgnJ m 232328.0 0.0   1   0.0 0.0 232328.0, 232328.0 0.14
AXB6/PgnJ m 364904.0 0.0   1   0.0 0.0 364904.0, 364904.0 1.28
AXB8/PgnJ m 249675.0 0.0   1   0.0 0.0 249675.0, 249675.0 0.29
BALB/cJ m 276438.0 89850.0   3 51875.0 0.325 214146.0, 379437.0 0.52
BTBR T+ Itpr3tf/J m 98951.0 0.0   1   0.0 0.0 98951.0, 98951.0 -1.02
BUB/BnJ m 227640.0 0.0   1   0.0 0.0 227640.0, 227640.0 0.1
BXA11/PgnJ m 121062.0 0.0   1   0.0 0.0 121062.0, 121062.0 -0.82
BXA12/PgnJ m 75452.0 0.0   1   0.0 0.0 75452.0, 75452.0 -1.22
BXA13/PgnJ m 213544.0 0.0   1   0.0 0.0 213544.0, 213544.0 -0.03
BXA14/PgnJ m 392039.0 0.0   1   0.0 0.0 392039.0, 392039.0 1.51
BXA16/PgnJ m 176993.0 92128.0   2   65145.0 0.521 111848.0, 242137.0 -0.34
BXA1/PgnJ m 352307.0 0.0   1   0.0 0.0 352307.0, 352307.0 1.17
BXA24/PgnJ m 469175.0 0.0   1   0.0 0.0 469175.0, 469175.0 2.18
BXA25/PgnJ m 94614.0 0.0   1   0.0 0.0 94614.0, 94614.0 -1.05
BXA26/PgnJ m 360258.0 0.0   1   0.0 0.0 360258.0, 360258.0 1.24
BXA2/PgnJ m 342363.0 0.0   1   0.0 0.0 342363.0, 342363.0 1.08
BXA4/PgnJ m 79322.0 0.0   1   0.0 0.0 79322.0, 79322.0 -1.18
BXA7/PgnJ m 514282.0 0.0   1   0.0 0.0 514282.0, 514282.0 2.57
BXA8/PgnJ m 232802.0 0.0   1   0.0 0.0 232802.0, 232802.0 0.14
BXD11/TyJ m 148226.0 0.0   1   0.0 0.0 148226.0, 148226.0 -0.59
BXD12/TyJ m 151087.0 0.0   1   0.0 0.0 151087.0, 151087.0 -0.57
BXD13/TyJ m 113274.0 0.0   1   0.0 0.0 113274.0, 113274.0 -0.89
BXD14/TyJ m 305321.0 0.0   1   0.0 0.0 305321.0, 305321.0 0.77
BXD15/TyJ m 149935.0 0.0   1   0.0 0.0 149935.0, 149935.0 -0.58
BXD18/TyJ m 125639.0 0.0   1   0.0 0.0 125639.0, 125639.0 -0.78
BXD19/TyJ m 138219.0 8514.0   2   6020.0 0.0616 132198.0, 144239.0 -0.68
BXD1/TyJ m 127743.0 0.0   1   0.0 0.0 127743.0, 127743.0 -0.77
BXD20/TyJ m 153573.0 0.0   1   0.0 0.0 153573.0, 153573.0 -0.54
BXD21/TyJ m 90013.0 0.0   1   0.0 0.0 90013.0, 90013.0 -1.09
BXD22/TyJ m 255356.0 0.0   1   0.0 0.0 255356.0, 255356.0 0.33
BXD24/TyJ m 137777.0 0.0   1   0.0 0.0 137777.0, 137777.0 -0.68
BXD24/TyJ-Cep290rd16/J m 63355.0 0.0   1   0.0 0.0 63355.0, 63355.0 -1.32
BXD28/TyJ m 296264.0 66145.0   2   46772.0 0.223 249492.0, 343036.0 0.69
BXD29-Tlr4lps-2J/J m 110335.0 0.0   1   0.0 0.0 110335.0, 110335.0 -0.92
BXD2/TyJ m 128889.0 0.0   1   0.0 0.0 128889.0, 128889.0 -0.76
BXD32/TyJ m 233497.0 0.0   1   0.0 0.0 233497.0, 233497.0 0.15
BXD33/TyJ m 179644.0 0.0   1   0.0 0.0 179644.0, 179644.0 -0.32
BXD34/TyJ m 192122.0 0.0   1   0.0 0.0 192122.0, 192122.0 -0.21
BXD36/TyJ m 95790.0 0.0   1   0.0 0.0 95790.0, 95790.0 -1.04
BXD38/TyJ m 125981.0 0.0   1   0.0 0.0 125981.0, 125981.0 -0.78
BXD39/TyJ m 220600.0 0.0   1   0.0 0.0 220600.0, 220600.0 0.03
BXD40/TyJ m 155964.0 0.0   1   0.0 0.0 155964.0, 155964.0 -0.52
BXD42/TyJ m 139156.0 0.0   1   0.0 0.0 139156.0, 139156.0 -0.67
BXD5/TyJ m 197206.0 0.0   1   0.0 0.0 197206.0, 197206.0 -0.17
BXD6/TyJ m 173416.0 0.0   1   0.0 0.0 173416.0, 173416.0 -0.37
BXD8/TyJ m 156174.0 0.0   1   0.0 0.0 156174.0, 156174.0 -0.52
BXD9/TyJ m 99403.0 0.0   1   0.0 0.0 99403.0, 99403.0 -1.01
BXH10/TyJ m 237103.0 0.0   1   0.0 0.0 237103.0, 237103.0 0.18
BXH19/TyJ m 193802.0 0.0   1   0.0 0.0 193802.0, 193802.0 -0.2
BXH20/KccJ m 243745.0 0.0   1   0.0 0.0 243745.0, 243745.0 0.23
BXH22/KccJ m 195574.0 0.0   1   0.0 0.0 195574.0, 195574.0 -0.18
BXH2/TyJ m 215387.0 0.0   1   0.0 0.0 215387.0, 215387.0 -0.01
BXH4/TyJ m 225515.0 27516.0   2   19457.0 0.122 206059.0, 244972.0 0.08
BXH6/TyJ m 288374.0 0.0   1   0.0 0.0 288374.0, 288374.0 0.62
BXH7/TyJ m 178079.0 0.0   1   0.0 0.0 178079.0, 178079.0 -0.33
BXH8/TyJ m 308611.0 0.0   1   0.0 0.0 308611.0, 308611.0 0.79
BXH9/TyJ m 78410.0 0.0   1   0.0 0.0 78410.0, 78410.0 -1.19
C3H/HeJ m 266034.0 154575.0   2   109301.0 0.581 156732.0, 375335.0 0.43
C57BL/6J m 413319.0 122688.0   5 54868.0 0.297 247263.0, 547038.0 1.7
C57L/J m 57877.0 0.0   1   0.0 0.0 57877.0, 57877.0 -1.37
C58/J m 347972.0 0.0   1   0.0 0.0 347972.0, 347972.0 1.13
CAST/EiJ m 224915.0 0.0   1   0.0 0.0 224915.0, 224915.0 0.07
CBA/J m 252274.0 0.0   1   0.0 0.0 252274.0, 252274.0 0.31
CE/J m 224028.0 0.0   1   0.0 0.0 224028.0, 224028.0 0.06
CXB11/HiAJ m 142312.0 16664.0   2   11783.0 0.117 130529.0, 154096.0 -0.64
CXB12/HiAJ m 506330.0 129011.0   2   91225.0 0.255 415106.0, 597555.0 2.5
CXB13/HiAJ m 417680.0 164429.0   3 94933.0 0.394 279183.0, 599404.0 1.73
CXB1/ByJ m 310942.0 32816.0   3 18946.0 0.106 273437.0, 334377.0 0.81
CXB2/ByJ m 374999.0 23432.0   3 13528.0 0.0625 348875.0, 394158.0 1.37
CXB3/ByJ m 300543.0 18820.0   2   13308.0 0.0626 287235.0, 313850.0 0.72
CXB4/ByJ m 345249.0 87272.0   2   61711.0 0.253 283539.0, 406960.0 1.11
CXB6/ByJ m 380151.0 154403.0   3 89145.0 0.406 213055.0, 517546.0 1.41
CXB7/ByJ m 435369.0 160600.0   2   113561.0 0.369 321807.0, 548930.0 1.89
CXB8/HiAJ m 643802.0 209906.0   3 121189.0 0.326 406462.0, 805047.0 3.69
CXB9/HiAJ m 497658.0 158995.0   3 91796.0 0.319 338844.0, 656833.0 2.42
DBA/2J m 110617.0 22405.0   4 11202.0 0.203 90159.0, 130617.0 -0.91
FVB/NJ m 73464.0 0.0   1   0.0 0.0 73464.0, 73464.0 -1.23
I/LnJ m 187090.0 0.0   1   0.0 0.0 187090.0, 187090.0 -0.25
KK/HlJ m 108363.0 0.0   1   0.0 0.0 108363.0, 108363.0 -0.93
LG/J m 50678.0 0.0   1   0.0 0.0 50678.0, 50678.0 -1.43
LP/J m 88768.0 0.0   1   0.0 0.0 88768.0, 88768.0 -1.1
MA/MyJ m 88781.0 0.0   1   0.0 0.0 88781.0, 88781.0 -1.1
NOD/ShiLtJ m 221150.0 0.0   1   0.0 0.0 221150.0, 221150.0 0.04
NON/ShiLtJ m 391344.0 0.0   1   0.0 0.0 391344.0, 391344.0 1.51
NZW/LacJ m 167417.0 0.0   1   0.0 0.0 167417.0, 167417.0 -0.42
PL/J m 183909.0 0.0   1   0.0 0.0 183909.0, 183909.0 -0.28
RIIIS/J m 51240.0 0.0   1   0.0 0.0 51240.0, 51240.0 -1.43
SEA/GnJ m 264393.0 0.0   1   0.0 0.0 264393.0, 264393.0 0.41
SJL/J m 156321.0 0.0   1   0.0 0.0 156321.0, 156321.0 -0.52
SM/J m 180523.0 0.0   1   0.0 0.0 180523.0, 180523.0 -0.31
SWR/J m 140717.0 0.0   1   0.0 0.0 140717.0, 140717.0 -0.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 184363.5 80062.5109 347070.0981 21656.9019
AXB19b/PgnJ m 245480.4 80062.5109 408186.9981 82773.8019
AXB24/PgnJ m 200611.6 80062.5109 363318.1981 37905.0019
BALB/cJ m 276437.9667 65370.7664 409287.3477 143588.5856
BXA16/PgnJ m 176992.7 80062.5109 339699.2981 14286.1019
BXD19/TyJ m 138218.7 80062.5109 300925.2981 0.0
BXD28/TyJ m 296264.05 80062.5109 458970.6481 133557.4519
BXH4/TyJ m 225515.2 80062.5109 388221.7981 62808.6019
C3H/HeJ m 266033.7 80062.5109 428740.2981 103327.1019
C57BL/6J m 413319.0 50635.9779 516223.6881 310414.3119
CXB11/HiAJ m 142312.4 80062.5109 305018.9981 0.0
CXB12/HiAJ m 506330.35 80062.5109 669036.9481 343623.7519
CXB13/HiAJ m 417679.9667 65370.7664 550529.3477 284830.5856
CXB1/ByJ m 310941.8667 65370.7664 443791.2477 178092.4856
CXB2/ByJ m 374999.0 65370.7664 507848.381 242149.619
CXB3/ByJ m 300542.85 80062.5109 463249.4481 137836.2519
CXB4/ByJ m 345249.3 80062.5109 507955.8981 182542.7019
CXB6/ByJ m 380150.7 65370.7664 513000.081 247301.319
CXB7/ByJ m 435368.8 80062.5109 598075.3981 272662.2019
CXB8/HiAJ m 643801.9667 65370.7664 776651.3477 510952.5856
CXB9/HiAJ m 497657.8 65370.7664 630507.181 364808.419
DBA/2J m 110616.8 56612.7443 225667.7389 0.0




  GWAS USING LINEAR MIXED MODELS