Project measure / variable:   HMDPpheno10   hypoxanthine

ID, description, units MPD:50505   hypoxanthine   hypoxanthine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno10 - hypoxanthine (16h fast), relative abundance

BXD22/TyJBXA1/PgnJSM/JSWR/JBXD14/TyJNON/ShiLtJPL/JAXB4/PgnJI/LnJLP/JNOD/ShiLtJCXB2/ByJDBA/2JFVB/NJBXH10/TyJCXB8/HiAJC3H/HeJAXB6/PgnJBALB/cJAXB19a/PgnJSJL/JSEA/GnJAXB19/PgnJBXD24/TyJ-Cep290<rd16>/JBXD40/TyJ129X1/SvJC58/JBXD29-Tlr4<lps-2J>/JCXB13/HiAJBXD34/TyJBXD33/TyJC57BL/6JCAST/EiJBXH4/TyJBXD5/TyJBXH2/TyJBXD20/TyJBXH20/KccJBXH22/KccJBXD19/TyJC57L/JAXB1/PgnJCXB11/HiAJBXD13/TyJAXB19b/PgnJBXH8/TyJCXB7/ByJBXD12/TyJBXD36/TyJBXD1/TyJBXD42/TyJLG/JBXA24/PgnJBXD11/TyJBXD38/TyJCBA/JBXD28/TyJBXD15/TyJBXD18/TyJKK/HlJCXB6/ByJBXA13/PgnJAXB2/PgnJRIIIS/JAXB23/PgnJBXD24/TyJBXH6/TyJBXD9/TyJCXB1/ByJCXB9/HiAJAXB15/PgnJBXD32/TyJBTBR T<+> Itpr3<tf>/JCXB3/ByJMA/MyJBXD6/TyJCXB12/HiAJBXH7/TyJAXB13/PgnJBXA26/PgnJBUB/BnJBXD39/TyJNZW/LacJA/JBXH9/TyJCE/JBXA25/PgnJAXB8/PgnJBXH19/TyJCXB4/ByJBXD21/TyJBXD2/TyJAXB5/PgnJAXB10/PgnJBXA2/PgnJBXA8/PgnJBXA16/PgnJBXD8/TyJAXB12/PgnJAKR/JBXA7/PgnJBXA4/PgnJAXB24/PgnJBXA14/PgnJBXA11/PgnJBXA12/PgnJ (no units) 500,000600,000700,000800,000900,0001,000,0001,100,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means753496   None
Median of the strain means760581   None
SD of the strain means± 97103
Coefficient of variation (CV)0.129
Min–max range of strain means448794   –   980499   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 344854099797.348 16421623799.8737 1.697 0.0828
Residuals 34 329020326294.174 9677068420.4169


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 822775.0 0.0   1   0.0 0.0 822775.0, 822775.0 0.71
A/J m 703625.0 81177.0   2   57401.0 0.115 646225.0, 761026.0 -0.51
AKR/J m 588129.0 0.0   1   0.0 0.0 588129.0, 588129.0 -1.7
AXB10/PgnJ m 627425.0 0.0   1   0.0 0.0 627425.0, 627425.0 -1.3
AXB12/PgnJ m 594592.0 0.0   1   0.0 0.0 594592.0, 594592.0 -1.64
AXB13/PgnJ m 708516.0 0.0   1   0.0 0.0 708516.0, 708516.0 -0.46
AXB15/PgnJ m 727321.0 0.0   1   0.0 0.0 727321.0, 727321.0 -0.27
AXB19a/PgnJ m 846127.0 0.0   1   0.0 0.0 846127.0, 846127.0 0.95
AXB19b/PgnJ m 781520.0 111902.0   2   79127.0 0.143 702393.0, 860646.0 0.29
AXB19/PgnJ m 834783.0 0.0   1   0.0 0.0 834783.0, 834783.0 0.84
AXB1/PgnJ m 789482.0 0.0   1   0.0 0.0 789482.0, 789482.0 0.37
AXB23/PgnJ m 738427.0 0.0   1   0.0 0.0 738427.0, 738427.0 -0.16
AXB24/PgnJ m 534971.0 99729.0   2   70519.0 0.186 464452.0, 605490.0 -2.25
AXB2/PgnJ m 738758.0 0.0   1   0.0 0.0 738758.0, 738758.0 -0.15
AXB4/PgnJ m 878579.0 0.0   1   0.0 0.0 878579.0, 878579.0 1.29
AXB5/PgnJ m 637867.0 0.0   1   0.0 0.0 637867.0, 637867.0 -1.19
AXB6/PgnJ m 847344.0 0.0   1   0.0 0.0 847344.0, 847344.0 0.97
AXB8/PgnJ m 657938.0 0.0   1   0.0 0.0 657938.0, 657938.0 -0.98
BALB/cJ m 846632.0 72761.0   3 42009.0 0.0859 778594.0, 923340.0 0.96
BTBR T+ Itpr3tf/J m 721854.0 0.0   1   0.0 0.0 721854.0, 721854.0 -0.33
BUB/BnJ m 707752.0 0.0   1   0.0 0.0 707752.0, 707752.0 -0.47
BXA11/PgnJ m 497770.0 0.0   1   0.0 0.0 497770.0, 497770.0 -2.63
BXA12/PgnJ m 448794.0 0.0   1   0.0 0.0 448794.0, 448794.0 -3.14
BXA13/PgnJ m 743107.0 0.0   1   0.0 0.0 743107.0, 743107.0 -0.11
BXA14/PgnJ m 532500.0 0.0   1   0.0 0.0 532500.0, 532500.0 -2.28
BXA16/PgnJ m 599697.0 29083.0   2   20565.0 0.0485 579133.0, 620262.0 -1.58
BXA1/PgnJ m 925356.0 0.0   1   0.0 0.0 925356.0, 925356.0 1.77
BXA24/PgnJ m 761269.0 0.0   1   0.0 0.0 761269.0, 761269.0 0.08
BXA25/PgnJ m 660741.0 0.0   1   0.0 0.0 660741.0, 660741.0 -0.96
BXA26/PgnJ m 707753.0 0.0   1   0.0 0.0 707753.0, 707753.0 -0.47
BXA2/PgnJ m 626763.0 0.0   1   0.0 0.0 626763.0, 626763.0 -1.31
BXA4/PgnJ m 545182.0 0.0   1   0.0 0.0 545182.0, 545182.0 -2.15
BXA7/PgnJ m 579870.0 0.0   1   0.0 0.0 579870.0, 579870.0 -1.79
BXA8/PgnJ m 616086.0 0.0   1   0.0 0.0 616086.0, 616086.0 -1.42
BXD11/TyJ m 759893.0 0.0   1   0.0 0.0 759893.0, 759893.0 0.07
BXD12/TyJ m 769381.0 0.0   1   0.0 0.0 769381.0, 769381.0 0.16
BXD13/TyJ m 782843.0 0.0   1   0.0 0.0 782843.0, 782843.0 0.3
BXD14/TyJ m 891130.0 0.0   1   0.0 0.0 891130.0, 891130.0 1.42
BXD15/TyJ m 754785.0 0.0   1   0.0 0.0 754785.0, 754785.0 0.01
BXD18/TyJ m 749638.0 0.0   1   0.0 0.0 749638.0, 749638.0 -0.04
BXD19/TyJ m 795866.0 67020.0   2   47391.0 0.0842 748476.0, 843257.0 0.44
BXD1/TyJ m 766895.0 0.0   1   0.0 0.0 766895.0, 766895.0 0.14
BXD20/TyJ m 804830.0 0.0   1   0.0 0.0 804830.0, 804830.0 0.53
BXD21/TyJ m 647597.0 0.0   1   0.0 0.0 647597.0, 647597.0 -1.09
BXD22/TyJ m 980499.0 0.0   1   0.0 0.0 980499.0, 980499.0 2.34
BXD24/TyJ m 736903.0 0.0   1   0.0 0.0 736903.0, 736903.0 -0.17
BXD24/TyJ-Cep290rd16/J m 829554.0 0.0   1   0.0 0.0 829554.0, 829554.0 0.78
BXD28/TyJ m 755619.0 111446.0   2   78805.0 0.147 676815.0, 834424.0 0.02
BXD29-Tlr4lps-2J/J m 821858.0 0.0   1   0.0 0.0 821858.0, 821858.0 0.7
BXD2/TyJ m 641724.0 0.0   1   0.0 0.0 641724.0, 641724.0 -1.15
BXD32/TyJ m 724252.0 0.0   1   0.0 0.0 724252.0, 724252.0 -0.3
BXD33/TyJ m 811124.0 0.0   1   0.0 0.0 811124.0, 811124.0 0.59
BXD34/TyJ m 817648.0 0.0   1   0.0 0.0 817648.0, 817648.0 0.66
BXD36/TyJ m 769203.0 0.0   1   0.0 0.0 769203.0, 769203.0 0.16
BXD38/TyJ m 758353.0 0.0   1   0.0 0.0 758353.0, 758353.0 0.05
BXD39/TyJ m 705616.0 0.0   1   0.0 0.0 705616.0, 705616.0 -0.49
BXD40/TyJ m 827133.0 0.0   1   0.0 0.0 827133.0, 827133.0 0.76
BXD42/TyJ m 763356.0 0.0   1   0.0 0.0 763356.0, 763356.0 0.1
BXD5/TyJ m 805713.0 0.0   1   0.0 0.0 805713.0, 805713.0 0.54
BXD6/TyJ m 712615.0 0.0   1   0.0 0.0 712615.0, 712615.0 -0.42
BXD8/TyJ m 597777.0 0.0   1   0.0 0.0 597777.0, 597777.0 -1.6
BXD9/TyJ m 736346.0 0.0   1   0.0 0.0 736346.0, 736346.0 -0.18
BXH10/TyJ m 849385.0 0.0   1   0.0 0.0 849385.0, 849385.0 0.99
BXH19/TyJ m 656742.0 0.0   1   0.0 0.0 656742.0, 656742.0 -1.0
BXH20/KccJ m 801053.0 0.0   1   0.0 0.0 801053.0, 801053.0 0.49
BXH22/KccJ m 798136.0 0.0   1   0.0 0.0 798136.0, 798136.0 0.46
BXH2/TyJ m 805038.0 0.0   1   0.0 0.0 805038.0, 805038.0 0.53
BXH4/TyJ m 806125.0 55352.0   2   39140.0 0.0687 766985.0, 845265.0 0.54
BXH6/TyJ m 736453.0 0.0   1   0.0 0.0 736453.0, 736453.0 -0.18
BXH7/TyJ m 709881.0 0.0   1   0.0 0.0 709881.0, 709881.0 -0.45
BXH8/TyJ m 780639.0 0.0   1   0.0 0.0 780639.0, 780639.0 0.28
BXH9/TyJ m 703457.0 0.0   1   0.0 0.0 703457.0, 703457.0 -0.52
C3H/HeJ m 848629.0 18200.0   2   12870.0 0.0214 835759.0, 861498.0 0.98
C57BL/6J m 807740.0 168961.0   5 75562.0 0.209 655478.0, 1092145.0 0.56
C57L/J m 792807.0 0.0   1   0.0 0.0 792807.0, 792807.0 0.4
C58/J m 822182.0 0.0   1   0.0 0.0 822182.0, 822182.0 0.71
CAST/EiJ m 806919.0 0.0   1   0.0 0.0 806919.0, 806919.0 0.55
CBA/J m 757397.0 0.0   1   0.0 0.0 757397.0, 757397.0 0.04
CE/J m 686563.0 0.0   1   0.0 0.0 686563.0, 686563.0 -0.69
CXB11/HiAJ m 789112.0 114091.0   2   80675.0 0.145 708438.0, 869787.0 0.37
CXB12/HiAJ m 710235.0 11624.0   2   8220.0 0.0164 702015.0, 718455.0 -0.45
CXB13/HiAJ m 818707.0 115305.0   3 66571.0 0.141 731851.0, 949526.0 0.67
CXB1/ByJ m 732190.0 61457.0   3 35482.0 0.0839 669858.0, 792733.0 -0.22
CXB2/ByJ m 856884.0 146146.0   3 84378.0 0.171 688195.0, 945334.0 1.06
CXB3/ByJ m 719503.0 119167.0   2   84264.0 0.166 635240.0, 803767.0 -0.35
CXB4/ByJ m 654506.0 30558.0   2   21608.0 0.0467 632898.0, 676113.0 -1.02
CXB6/ByJ m 745558.0 5313.0   3 3067.0 0.00713 740440.0, 751046.0 -0.08
CXB7/ByJ m 780619.0 46262.0   2   32712.0 0.0593 747907.0, 813331.0 0.28
CXB8/HiAJ m 848999.0 84520.0   3 48798.0 0.0996 774512.0, 940855.0 0.98
CXB9/HiAJ m 728042.0 125108.0   3 72231.0 0.172 583580.0, 800329.0 -0.26
DBA/2J m 850786.0 19097.0   4 9549.0 0.0224 833835.0, 869610.0 1.0
FVB/NJ m 850272.0 0.0   1   0.0 0.0 850272.0, 850272.0 1.0
I/LnJ m 875107.0 0.0   1   0.0 0.0 875107.0, 875107.0 1.25
KK/HlJ m 749236.0 0.0   1   0.0 0.0 749236.0, 749236.0 -0.04
LG/J m 763113.0 0.0   1   0.0 0.0 763113.0, 763113.0 0.1
LP/J m 867805.0 0.0   1   0.0 0.0 867805.0, 867805.0 1.18
MA/MyJ m 716775.0 0.0   1   0.0 0.0 716775.0, 716775.0 -0.38
NOD/ShiLtJ m 863926.0 0.0   1   0.0 0.0 863926.0, 863926.0 1.14
NON/ShiLtJ m 884984.0 0.0   1   0.0 0.0 884984.0, 884984.0 1.35
NZW/LacJ m 704779.0 0.0   1   0.0 0.0 704779.0, 704779.0 -0.5
PL/J m 884894.0 0.0   1   0.0 0.0 884894.0, 884894.0 1.35
RIIIS/J m 738742.0 0.0   1   0.0 0.0 738742.0, 738742.0 -0.15
SEA/GnJ m 839215.0 0.0   1   0.0 0.0 839215.0, 839215.0 0.88
SJL/J m 839697.0 0.0   1   0.0 0.0 839697.0, 839697.0 0.89
SM/J m 895782.0 0.0   1   0.0 0.0 895782.0, 895782.0 1.47
SWR/J m 894533.0 0.0   1   0.0 0.0 894533.0, 894533.0 1.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 703625.45 69559.5731 844987.5105 562263.3895
AXB19b/PgnJ m 781519.5 69559.5731 922881.5605 640157.4395
AXB24/PgnJ m 534970.85 69559.5731 676332.9105 393608.7895
BALB/cJ m 846632.4 56795.1536 962054.0391 731210.7609
BXA16/PgnJ m 599697.45 69559.5731 741059.5105 458335.3895
BXD19/TyJ m 795866.35 69559.5731 937228.4105 654504.2895
BXD28/TyJ m 755619.35 69559.5731 896981.4105 614257.2895
BXH4/TyJ m 806124.95 69559.5731 947487.0105 664762.8895
C3H/HeJ m 848628.85 69559.5731 989990.9105 707266.7895
C57BL/6J m 807739.66 43993.3368 897144.8772 718334.4428
CXB11/HiAJ m 789112.25 69559.5731 930474.3105 647750.1895
CXB12/HiAJ m 710235.0 69559.5731 851597.0605 568872.9395
CXB13/HiAJ m 818706.9667 56795.1536 934128.6057 703285.3276
CXB1/ByJ m 732190.1333 56795.1536 847611.7724 616768.4943
CXB2/ByJ m 856883.9333 56795.1536 972305.5724 741462.2943
CXB3/ByJ m 719503.15 69559.5731 860865.2105 578141.0895
CXB4/ByJ m 654505.75 69559.5731 795867.8105 513143.6895
CXB6/ByJ m 745558.2333 56795.1536 860979.8724 630136.5943
CXB7/ByJ m 780618.85 69559.5731 921980.9105 639256.7895
CXB8/HiAJ m 848999.0333 56795.1536 964420.6724 733577.3943
CXB9/HiAJ m 728042.2667 56795.1536 843463.9057 612620.6276
DBA/2J m 850786.075 49186.0458 950744.1466 750828.0034




  GWAS USING LINEAR MIXED MODELS

Loading data... this may take some time.