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Project measure / variable:   HMDPpheno8   stearate

ID, description, units MPD:50370   stearate   liver stearate (18:0) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver stearate (18:0) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means16544289   None
Median of the strain means16689190   None
SD of the strain means± 2922907
Coefficient of variation (CV)0.177
Min–max range of strain means9684239   –   26207148   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 436116390634227.0 20767447173058.4 1.6671 0.09
Residuals 34 423535674486573.0 12456931602546.3


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 16343317.0 0.0   1   0.0 0.0 16343317.0, 16343317.0 -0.07
A/J m 12358956.0 2169380.0   2   1533984.0 0.176 10824973.0, 13892940.0 -1.43
AKR/J m 12897958.0 0.0   1   0.0 0.0 12897958.0, 12897958.0 -1.25
AXB10/PgnJ m 14215266.0 0.0   1   0.0 0.0 14215266.0, 14215266.0 -0.8
AXB12/PgnJ m 17326298.0 0.0   1   0.0 0.0 17326298.0, 17326298.0 0.27
AXB13/PgnJ m 10463018.0 0.0   1   0.0 0.0 10463018.0, 10463018.0 -2.08
AXB15/PgnJ m 13158783.0 0.0   1   0.0 0.0 13158783.0, 13158783.0 -1.16
AXB19a/PgnJ m 15283572.0 0.0   1   0.0 0.0 15283572.0, 15283572.0 -0.43
AXB19b/PgnJ m 16058080.0 1888418.0   2   1335314.0 0.118 14722767.0, 17393394.0 -0.17
AXB19/PgnJ m 16889134.0 0.0   1   0.0 0.0 16889134.0, 16889134.0 0.12
AXB1/PgnJ m 12666629.0 0.0   1   0.0 0.0 12666629.0, 12666629.0 -1.33
AXB23/PgnJ m 20428386.0 0.0   1   0.0 0.0 20428386.0, 20428386.0 1.33
AXB24/PgnJ m 18909671.0 4913669.0   2   3474489.0 0.26 15435182.0, 22384160.0 0.81
AXB2/PgnJ m 19655354.0 0.0   1   0.0 0.0 19655354.0, 19655354.0 1.06
AXB4/PgnJ m 15923743.0 0.0   1   0.0 0.0 15923743.0, 15923743.0 -0.21
AXB5/PgnJ m 15288509.0 0.0   1   0.0 0.0 15288509.0, 15288509.0 -0.43
AXB6/PgnJ m 16982792.0 0.0   1   0.0 0.0 16982792.0, 16982792.0 0.15
AXB8/PgnJ m 16403137.0 0.0   1   0.0 0.0 16403137.0, 16403137.0 -0.05
BALB/cJ m 16485249.0 837224.0   3 483371.0 0.0508 15541880.0, 17139922.0 -0.02
BTBR T+ Itpr3tf/J m 9684239.0 0.0   1   0.0 0.0 9684239.0, 9684239.0 -2.35
BUB/BnJ m 21083224.0 0.0   1   0.0 0.0 21083224.0, 21083224.0 1.55
BXA11/PgnJ m 17316340.0 0.0   1   0.0 0.0 17316340.0, 17316340.0 0.26
BXA12/PgnJ m 18922332.0 0.0   1   0.0 0.0 18922332.0, 18922332.0 0.81
BXA13/PgnJ m 15330213.0 0.0   1   0.0 0.0 15330213.0, 15330213.0 -0.42
BXA14/PgnJ m 11505051.0 0.0   1   0.0 0.0 11505051.0, 11505051.0 -1.72
BXA16/PgnJ m 15714270.0 585236.0   2   413824.0 0.0372 15300445.0, 16128094.0 -0.28
BXA1/PgnJ m 20956756.0 0.0   1   0.0 0.0 20956756.0, 20956756.0 1.51
BXA24/PgnJ m 13653716.0 0.0   1   0.0 0.0 13653716.0, 13653716.0 -0.99
BXA25/PgnJ m 16009096.0 0.0   1   0.0 0.0 16009096.0, 16009096.0 -0.18
BXA26/PgnJ m 21313126.0 0.0   1   0.0 0.0 21313126.0, 21313126.0 1.63
BXA2/PgnJ m 15759604.0 0.0   1   0.0 0.0 15759604.0, 15759604.0 -0.27
BXA4/PgnJ m 15307486.0 0.0   1   0.0 0.0 15307486.0, 15307486.0 -0.42
BXA7/PgnJ m 10705015.0 0.0   1   0.0 0.0 10705015.0, 10705015.0 -2.0
BXA8/PgnJ m 17189828.0 0.0   1   0.0 0.0 17189828.0, 17189828.0 0.22
BXD11/TyJ m 11594893.0 0.0   1   0.0 0.0 11594893.0, 11594893.0 -1.69
BXD12/TyJ m 16181454.0 0.0   1   0.0 0.0 16181454.0, 16181454.0 -0.12
BXD13/TyJ m 17607238.0 0.0   1   0.0 0.0 17607238.0, 17607238.0 0.36
BXD14/TyJ m 13610522.0 0.0   1   0.0 0.0 13610522.0, 13610522.0 -1.0
BXD15/TyJ m 17151604.0 0.0   1   0.0 0.0 17151604.0, 17151604.0 0.21
BXD18/TyJ m 16923002.0 0.0   1   0.0 0.0 16923002.0, 16923002.0 0.13
BXD19/TyJ m 15866742.0 4341898.0   2   3070185.0 0.274 12796557.0, 18936928.0 -0.23
BXD1/TyJ m 16972932.0 0.0   1   0.0 0.0 16972932.0, 16972932.0 0.15
BXD20/TyJ m 16908930.0 0.0   1   0.0 0.0 16908930.0, 16908930.0 0.12
BXD21/TyJ m 18000252.0 0.0   1   0.0 0.0 18000252.0, 18000252.0 0.5
BXD22/TyJ m 16832464.0 0.0   1   0.0 0.0 16832464.0, 16832464.0 0.1
BXD24/TyJ m 17053658.0 0.0   1   0.0 0.0 17053658.0, 17053658.0 0.17
BXD24/TyJ-Cep290rd16/J m 14576087.0 0.0   1   0.0 0.0 14576087.0, 14576087.0 -0.67
BXD28/TyJ m 18957299.0 1908890.0   2   1349789.0 0.101 17607510.0, 20307088.0 0.83
BXD29-Tlr4lps-2J/J m 16675317.0 0.0   1   0.0 0.0 16675317.0, 16675317.0 0.04
BXD2/TyJ m 15923251.0 0.0   1   0.0 0.0 15923251.0, 15923251.0 -0.21
BXD32/TyJ m 15308519.0 0.0   1   0.0 0.0 15308519.0, 15308519.0 -0.42
BXD33/TyJ m 13111958.0 0.0   1   0.0 0.0 13111958.0, 13111958.0 -1.17
BXD34/TyJ m 19766006.0 0.0   1   0.0 0.0 19766006.0, 19766006.0 1.1
BXD36/TyJ m 17387586.0 0.0   1   0.0 0.0 17387586.0, 17387586.0 0.29
BXD38/TyJ m 21067210.0 0.0   1   0.0 0.0 21067210.0, 21067210.0 1.55
BXD39/TyJ m 18065130.0 0.0   1   0.0 0.0 18065130.0, 18065130.0 0.52
BXD40/TyJ m 18060350.0 0.0   1   0.0 0.0 18060350.0, 18060350.0 0.52
BXD42/TyJ m 14261650.0 0.0   1   0.0 0.0 14261650.0, 14261650.0 -0.78
BXD5/TyJ m 18438632.0 0.0   1   0.0 0.0 18438632.0, 18438632.0 0.65
BXD6/TyJ m 15725411.0 0.0   1   0.0 0.0 15725411.0, 15725411.0 -0.28
BXD8/TyJ m 18565090.0 0.0   1   0.0 0.0 18565090.0, 18565090.0 0.69
BXD9/TyJ m 18617774.0 0.0   1   0.0 0.0 18617774.0, 18617774.0 0.71
BXH10/TyJ m 13305184.0 0.0   1   0.0 0.0 13305184.0, 13305184.0 -1.11
BXH19/TyJ m 10823887.0 0.0   1   0.0 0.0 10823887.0, 10823887.0 -1.96
BXH20/KccJ m 16697029.0 0.0   1   0.0 0.0 16697029.0, 16697029.0 0.05
BXH22/KccJ m 16463880.0 0.0   1   0.0 0.0 16463880.0, 16463880.0 -0.03
BXH2/TyJ m 15252974.0 0.0   1   0.0 0.0 15252974.0, 15252974.0 -0.44
BXH4/TyJ m 14621317.0 581021.0   2   410844.0 0.0397 14210473.0, 15032161.0 -0.66
BXH6/TyJ m 11388561.0 0.0   1   0.0 0.0 11388561.0, 11388561.0 -1.76
BXH7/TyJ m 14101200.0 0.0   1   0.0 0.0 14101200.0, 14101200.0 -0.84
BXH8/TyJ m 16697682.0 0.0   1   0.0 0.0 16697682.0, 16697682.0 0.05
BXH9/TyJ m 16815274.0 0.0   1   0.0 0.0 16815274.0, 16815274.0 0.09
C3H/HeJ m 14990690.0 3316181.0   2   2344894.0 0.221 12645796.0, 17335584.0 -0.53
C57BL/6J m 15542249.0 3102619.0   5 1387533.0 0.2 10307784.0, 18261982.0 -0.34
C57L/J m 26207148.0 0.0   1   0.0 0.0 26207148.0, 26207148.0 3.31
C58/J m 16321445.0 0.0   1   0.0 0.0 16321445.0, 16321445.0 -0.08
CAST/EiJ m 12550707.0 0.0   1   0.0 0.0 12550707.0, 12550707.0 -1.37
CBA/J m 17315502.0 0.0   1   0.0 0.0 17315502.0, 17315502.0 0.26
CE/J m 18586896.0 0.0   1   0.0 0.0 18586896.0, 18586896.0 0.7
CXB11/HiAJ m 17151352.0 595359.0   2   420982.0 0.0347 16730369.0, 17572334.0 0.21
CXB12/HiAJ m 21610508.0 2450037.0   2   1732438.0 0.113 19878070.0, 23342946.0 1.73
CXB13/HiAJ m 19482379.0 2863589.0   3 1653294.0 0.147 17404392.0, 22748842.0 1.01
CXB1/ByJ m 17231688.0 3226777.0   3 1862981.0 0.187 13706137.0, 20038474.0 0.24
CXB2/ByJ m 21869527.0 5550944.0   3 3204839.0 0.254 17902036.0, 28213002.0 1.82
CXB3/ByJ m 19037848.0 1773876.0   2   1254320.0 0.0932 17783528.0, 20292168.0 0.85
CXB4/ByJ m 18822998.0 900130.0   2   636488.0 0.0478 18186510.0, 19459486.0 0.78
CXB6/ByJ m 14565192.0 5582393.0   3 3222996.0 0.383 10680726.0, 20962344.0 -0.68
CXB7/ByJ m 16681352.0 1961422.0   2   1386934.0 0.118 15294417.0, 18068286.0 0.05
CXB8/HiAJ m 23407421.0 6357459.0   3 3670481.0 0.272 18779208.0, 30656304.0 2.35
CXB9/HiAJ m 22288578.0 4174804.0   3 2410324.0 0.187 19400508.0, 27075258.0 1.97
DBA/2J m 17843497.0 2944422.0   4 1472211.0 0.165 13841767.0, 20856424.0 0.44
FVB/NJ m 17090464.0 0.0   1   0.0 0.0 17090464.0, 17090464.0 0.19
I/LnJ m 14600181.0 0.0   1   0.0 0.0 14600181.0, 14600181.0 -0.67
KK/HlJ m 17511028.0 0.0   1   0.0 0.0 17511028.0, 17511028.0 0.33
LG/J m 12877019.0 0.0   1   0.0 0.0 12877019.0, 12877019.0 -1.25
LP/J m 13812102.0 0.0   1   0.0 0.0 13812102.0, 13812102.0 -0.93
MA/MyJ m 15240453.0 0.0   1   0.0 0.0 15240453.0, 15240453.0 -0.45
NOD/ShiLtJ m 16959066.0 0.0   1   0.0 0.0 16959066.0, 16959066.0 0.14
NON/ShiLtJ m 13545740.0 0.0   1   0.0 0.0 13545740.0, 13545740.0 -1.03
NZW/LacJ m 16839000.0 0.0   1   0.0 0.0 16839000.0, 16839000.0 0.1
PL/J m 18186122.0 0.0   1   0.0 0.0 18186122.0, 18186122.0 0.56
RIIIS/J m 19321348.0 0.0   1   0.0 0.0 19321348.0, 19321348.0 0.95
SEA/GnJ m 16648565.0 0.0   1   0.0 0.0 16648565.0, 16648565.0 0.04
SJL/J m 14228880.0 0.0   1   0.0 0.0 14228880.0, 14228880.0 -0.79
SM/J m 18883468.0 0.0   1   0.0 0.0 18883468.0, 18883468.0 0.8
SWR/J m 22878102.0 0.0   1   0.0 0.0 22878102.0, 22878102.0 2.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 12358956.5 2495689.4441 17430807.6697 7287105.3303
AXB19b/PgnJ m 16058080.5 2495689.4441 21129931.6697 10986229.3303
AXB24/PgnJ m 18909671.0 2495689.4441 23981522.1697 13837819.8303
BALB/cJ m 16485249.3333 2037721.8981 20626398.4724 12344100.1943
BXA16/PgnJ m 15714269.5 2495689.4441 20786120.6697 10642418.3303
BXD19/TyJ m 15866742.5 2495689.4441 20938593.6697 10794891.3303
BXD28/TyJ m 18957299.0 2495689.4441 24029150.1697 13885447.8303
BXH4/TyJ m 14621317.0 2495689.4441 19693168.1697 9549465.8303
C3H/HeJ m 14990690.0 2495689.4441 20062541.1697 9918838.8303
C57BL/6J m 15542249.0 1578412.5951 18749969.3299 12334528.6701
CXB11/HiAJ m 17151351.5 2495689.4441 22223202.6697 12079500.3303
CXB12/HiAJ m 21610508.0 2495689.4441 26682359.1697 16538656.8303
CXB13/HiAJ m 19482378.6667 2037721.8981 23623527.8057 15341229.5276
CXB1/ByJ m 17231688.3333 2037721.8981 21372837.4724 13090539.1943
CXB2/ByJ m 21869526.6667 2037721.8981 26010675.8057 17728377.5276
CXB3/ByJ m 19037848.0 2495689.4441 24109699.1697 13965996.8303
CXB4/ByJ m 18822998.0 2495689.4441 23894849.1697 13751146.8303
CXB6/ByJ m 14565192.0 2037721.8981 18706341.139 10424042.861
CXB7/ByJ m 16681351.5 2495689.4441 21753202.6697 11609500.3303
CXB8/HiAJ m 23407420.6667 2037721.8981 27548569.8057 19266271.5276
CXB9/HiAJ m 22288578.0 2037721.8981 26429727.139 18147428.861
DBA/2J m 17843497.25 1764718.9296 21429837.6053 14257156.8947




  GWAS USING LINEAR MIXED MODELS