Project measure / variable:   HMDPpheno8   docosadienoate

ID, description, units MPD:50358   docosadienoate   liver docosadienoate (22:2n6) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver docosadienoate (22:2n6) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means65541   None
Median of the strain means59494   None
SD of the strain means± 35243
Coefficient of variation (CV)0.538
Min–max range of strain means22508   –   314783   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 54026977880.0355 2572713232.3826 1.4289 0.173
Residuals 34 61218216655.2239 1800535783.9772


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 106906.0 0.0   1   0.0 0.0 106906.0, 106906.0 1.17
A/J m 40498.0 2840.0   2   2008.0 0.0701 38490.0, 42506.0 -0.71
AKR/J m 37502.0 0.0   1   0.0 0.0 37502.0, 37502.0 -0.8
AXB10/PgnJ m 55580.0 0.0   1   0.0 0.0 55580.0, 55580.0 -0.28
AXB12/PgnJ m 50657.0 0.0   1   0.0 0.0 50657.0, 50657.0 -0.42
AXB13/PgnJ m 22882.0 0.0   1   0.0 0.0 22882.0, 22882.0 -1.21
AXB15/PgnJ m 30192.0 0.0   1   0.0 0.0 30192.0, 30192.0 -1.0
AXB19a/PgnJ m 49356.0 0.0   1   0.0 0.0 49356.0, 49356.0 -0.46
AXB19b/PgnJ m 68504.0 14348.0   2   10146.0 0.209 58358.0, 78649.0 0.08
AXB19/PgnJ m 74884.0 0.0   1   0.0 0.0 74884.0, 74884.0 0.27
AXB1/PgnJ m 76117.0 0.0   1   0.0 0.0 76117.0, 76117.0 0.3
AXB23/PgnJ m 65783.0 0.0   1   0.0 0.0 65783.0, 65783.0 0.01
AXB24/PgnJ m 68784.0 32477.0   2   22965.0 0.472 45820.0, 91749.0 0.09
AXB2/PgnJ m 69730.0 0.0   1   0.0 0.0 69730.0, 69730.0 0.12
AXB4/PgnJ m 55026.0 0.0   1   0.0 0.0 55026.0, 55026.0 -0.3
AXB5/PgnJ m 34988.0 0.0   1   0.0 0.0 34988.0, 34988.0 -0.87
AXB6/PgnJ m 113935.0 0.0   1   0.0 0.0 113935.0, 113935.0 1.37
AXB8/PgnJ m 66863.0 0.0   1   0.0 0.0 66863.0, 66863.0 0.04
BALB/cJ m 55210.0 3965.0   3 2289.0 0.0718 50728.0, 58257.0 -0.29
BTBR T+ Itpr3tf/J m 25216.0 0.0   1   0.0 0.0 25216.0, 25216.0 -1.14
BUB/BnJ m 84000.0 0.0   1   0.0 0.0 84000.0, 84000.0 0.52
BXA11/PgnJ m 56669.0 0.0   1   0.0 0.0 56669.0, 56669.0 -0.25
BXA12/PgnJ m 54788.0 0.0   1   0.0 0.0 54788.0, 54788.0 -0.31
BXA13/PgnJ m 43647.0 0.0   1   0.0 0.0 43647.0, 43647.0 -0.62
BXA14/PgnJ m 80147.0 0.0   1   0.0 0.0 80147.0, 80147.0 0.41
BXA16/PgnJ m 64930.0 2526.0   2   1786.0 0.0389 63143.0, 66716.0 -0.02
BXA1/PgnJ m 126200.0 0.0   1   0.0 0.0 126200.0, 126200.0 1.72
BXA24/PgnJ m 54121.0 0.0   1   0.0 0.0 54121.0, 54121.0 -0.32
BXA25/PgnJ m 77000.0 0.0   1   0.0 0.0 77000.0, 77000.0 0.33
BXA26/PgnJ m 95110.0 0.0   1   0.0 0.0 95110.0, 95110.0 0.84
BXA2/PgnJ m 75590.0 0.0   1   0.0 0.0 75590.0, 75590.0 0.29
BXA4/PgnJ m 54889.0 0.0   1   0.0 0.0 54889.0, 54889.0 -0.3
BXA7/PgnJ m 35848.0 0.0   1   0.0 0.0 35848.0, 35848.0 -0.84
BXA8/PgnJ m 83720.0 0.0   1   0.0 0.0 83720.0, 83720.0 0.52
BXD11/TyJ m 22508.0 0.0   1   0.0 0.0 22508.0, 22508.0 -1.22
BXD12/TyJ m 74593.0 0.0   1   0.0 0.0 74593.0, 74593.0 0.26
BXD13/TyJ m 64928.0 0.0   1   0.0 0.0 64928.0, 64928.0 -0.02
BXD14/TyJ m 43767.0 0.0   1   0.0 0.0 43767.0, 43767.0 -0.62
BXD15/TyJ m 38098.0 0.0   1   0.0 0.0 38098.0, 38098.0 -0.78
BXD18/TyJ m 59117.0 0.0   1   0.0 0.0 59117.0, 59117.0 -0.18
BXD19/TyJ m 53154.0 11403.0   2   8063.0 0.215 45091.0, 61218.0 -0.35
BXD1/TyJ m 57795.0 0.0   1   0.0 0.0 57795.0, 57795.0 -0.22
BXD20/TyJ m 70496.0 0.0   1   0.0 0.0 70496.0, 70496.0 0.14
BXD21/TyJ m 44732.0 0.0   1   0.0 0.0 44732.0, 44732.0 -0.59
BXD22/TyJ m 48302.0 0.0   1   0.0 0.0 48302.0, 48302.0 -0.49
BXD24/TyJ m 47927.0 0.0   1   0.0 0.0 47927.0, 47927.0 -0.5
BXD24/TyJ-Cep290rd16/J m 34680.0 0.0   1   0.0 0.0 34680.0, 34680.0 -0.88
BXD28/TyJ m 48274.0 6963.0   2   4923.0 0.144 43351.0, 53198.0 -0.49
BXD29-Tlr4lps-2J/J m 44497.0 0.0   1   0.0 0.0 44497.0, 44497.0 -0.6
BXD2/TyJ m 83280.0 0.0   1   0.0 0.0 83280.0, 83280.0 0.5
BXD32/TyJ m 69925.0 0.0   1   0.0 0.0 69925.0, 69925.0 0.12
BXD33/TyJ m 40932.0 0.0   1   0.0 0.0 40932.0, 40932.0 -0.7
BXD34/TyJ m 41174.0 0.0   1   0.0 0.0 41174.0, 41174.0 -0.69
BXD36/TyJ m 59016.0 0.0   1   0.0 0.0 59016.0, 59016.0 -0.19
BXD38/TyJ m 61204.0 0.0   1   0.0 0.0 61204.0, 61204.0 -0.12
BXD39/TyJ m 106896.0 0.0   1   0.0 0.0 106896.0, 106896.0 1.17
BXD40/TyJ m 54658.0 0.0   1   0.0 0.0 54658.0, 54658.0 -0.31
BXD42/TyJ m 60720.0 0.0   1   0.0 0.0 60720.0, 60720.0 -0.14
BXD5/TyJ m 61817.0 0.0   1   0.0 0.0 61817.0, 61817.0 -0.11
BXD6/TyJ m 65846.0 0.0   1   0.0 0.0 65846.0, 65846.0 0.01
BXD8/TyJ m 73030.0 0.0   1   0.0 0.0 73030.0, 73030.0 0.21
BXD9/TyJ m 71708.0 0.0   1   0.0 0.0 71708.0, 71708.0 0.17
BXH10/TyJ m 49581.0 0.0   1   0.0 0.0 49581.0, 49581.0 -0.45
BXH19/TyJ m 59579.0 0.0   1   0.0 0.0 59579.0, 59579.0 -0.17
BXH20/KccJ m 30072.0 0.0   1   0.0 0.0 30072.0, 30072.0 -1.01
BXH22/KccJ m 60067.0 0.0   1   0.0 0.0 60067.0, 60067.0 -0.16
BXH2/TyJ m 45031.0 0.0   1   0.0 0.0 45031.0, 45031.0 -0.58
BXH4/TyJ m 43413.0 1203.0   2   850.0 0.0277 42562.0, 44263.0 -0.63
BXH6/TyJ m 44388.0 0.0   1   0.0 0.0 44388.0, 44388.0 -0.6
BXH7/TyJ m 35946.0 0.0   1   0.0 0.0 35946.0, 35946.0 -0.84
BXH8/TyJ m 58939.0 0.0   1   0.0 0.0 58939.0, 58939.0 -0.19
BXH9/TyJ m 49869.0 0.0   1   0.0 0.0 49869.0, 49869.0 -0.44
C3H/HeJ m 77116.0 28415.0   2   20092.0 0.368 57024.0, 97209.0 0.33
C57BL/6J m 62993.0 18639.0   5 8336.0 0.296 48661.0, 95445.0 -0.07
C57L/J m 129881.0 0.0   1   0.0 0.0 129881.0, 129881.0 1.83
C58/J m 153249.0 0.0   1   0.0 0.0 153249.0, 153249.0 2.49
CAST/EiJ m 61194.0 0.0   1   0.0 0.0 61194.0, 61194.0 -0.12
CBA/J m 71943.0 0.0   1   0.0 0.0 71943.0, 71943.0 0.18
CE/J m 70441.0 0.0   1   0.0 0.0 70441.0, 70441.0 0.14
CXB11/HiAJ m 61644.0 12421.0   2   8783.0 0.201 52861.0, 70427.0 -0.11
CXB12/HiAJ m 59408.0 17053.0   2   12058.0 0.287 47350.0, 71466.0 -0.17
CXB13/HiAJ m 70901.0 12490.0   3 7211.0 0.176 62153.0, 85205.0 0.15
CXB1/ByJ m 73624.0 19053.0   3 11000.0 0.259 57836.0, 94786.0 0.23
CXB2/ByJ m 74458.0 21444.0   3 12381.0 0.288 53618.0, 96460.0 0.25
CXB3/ByJ m 83490.0 17264.0   2   12208.0 0.207 71282.0, 95697.0 0.51
CXB4/ByJ m 76656.0 561.0   2   397.0 0.00732 76259.0, 77053.0 0.32
CXB6/ByJ m 91719.0 67861.0   3 39180.0 0.74 51646.0, 170072.0 0.74
CXB7/ByJ m 70244.0 18106.0   2   12803.0 0.258 57441.0, 83046.0 0.13
CXB8/HiAJ m 101785.0 13434.0   3 7756.0 0.132 86280.0, 109947.0 1.03
CXB9/HiAJ m 188292.0 149882.0   3 86534.0 0.796 95429.0, 361202.0 3.48
DBA/2J m 49809.0 1310.0   4 655.0 0.0263 48368.0, 51548.0 -0.45
FVB/NJ m 86243.0 0.0   1   0.0 0.0 86243.0, 86243.0 0.59
I/LnJ m 53714.0 0.0   1   0.0 0.0 53714.0, 53714.0 -0.34
KK/HlJ m 314783.0 0.0   1   0.0 0.0 314783.0, 314783.0 7.07
LG/J m 37312.0 0.0   1   0.0 0.0 37312.0, 37312.0 -0.8
LP/J m 66108.0 0.0   1   0.0 0.0 66108.0, 66108.0 0.02
MA/MyJ m 52326.0 0.0   1   0.0 0.0 52326.0, 52326.0 -0.37
NOD/ShiLtJ m 39482.0 0.0   1   0.0 0.0 39482.0, 39482.0 -0.74
NON/ShiLtJ m 32356.0 0.0   1   0.0 0.0 32356.0, 32356.0 -0.94
NZW/LacJ m 73178.0 0.0   1   0.0 0.0 73178.0, 73178.0 0.22
PL/J m 45058.0 0.0   1   0.0 0.0 45058.0, 45058.0 -0.58
RIIIS/J m 40182.0 0.0   1   0.0 0.0 40182.0, 40182.0 -0.72
SEA/GnJ m 58435.0 0.0   1   0.0 0.0 58435.0, 58435.0 -0.2
SJL/J m 56751.0 0.0   1   0.0 0.0 56751.0, 56751.0 -0.25
SM/J m 74200.0 0.0   1   0.0 0.0 74200.0, 74200.0 0.25
SWR/J m 53136.0 0.0   1   0.0 0.0 53136.0, 53136.0 -0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 40498.1 30004.4645 101474.5083 0.0
AXB19b/PgnJ m 68503.7 30004.4645 129480.1083 7527.2917
AXB24/PgnJ m 68784.5 30004.4645 129760.9083 7808.0917
BALB/cJ m 55209.9667 24498.5427 104996.9956 5422.9378
BXA16/PgnJ m 64929.65 30004.4645 125906.0583 3953.2417
BXD19/TyJ m 53154.45 30004.4645 114130.8583 0.0
BXD28/TyJ m 48274.3 30004.4645 109250.7083 0.0
BXH4/TyJ m 43412.8 30004.4645 104389.2083 0.0
C3H/HeJ m 77116.2 30004.4645 138092.6083 16139.7917
C57BL/6J m 62992.78 18976.4896 101557.6468 24427.9132
CXB11/HiAJ m 61644.0 30004.4645 122620.4083 667.5917
CXB12/HiAJ m 59407.8 30004.4645 120384.2083 0.0
CXB13/HiAJ m 70901.0667 24498.5427 120688.0956 21114.0378
CXB1/ByJ m 73623.5667 24498.5427 123410.5956 23836.5378
CXB2/ByJ m 74458.1 24498.5427 124245.1289 24671.0711
CXB3/ByJ m 83489.6 30004.4645 144466.0083 22513.1917
CXB4/ByJ m 76656.05 30004.4645 137632.4583 15679.6417
CXB6/ByJ m 91718.8 24498.5427 141505.8289 41931.7711
CXB7/ByJ m 70243.8 30004.4645 131220.2083 9267.3917
CXB8/HiAJ m 101785.1667 24498.5427 151572.1956 51998.1378
CXB9/HiAJ m 188292.0333 24498.5427 238079.0622 138505.0044
DBA/2J m 49808.975 21216.3603 92925.8068 6692.1432




  GWAS USING LINEAR MIXED MODELS