Project measure / variable:   HMDPpheno8   dihomo_linoleate

ID, description, units MPD:50357   dihomo_linoleate   liver dihomo-linoleate (20:2n6) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver dihomo-linoleate (20:2n6) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1931568   None
Median of the strain means1832780   None
SD of the strain means± 588522
Coefficient of variation (CV)0.305
Min–max range of strain means953432   –   4006314   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 17627434017998.3 839401619904.68 1.3003 0.242
Residuals 34 21949093722436.5 645561580071.663


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 2280804.0 0.0   1   0.0 0.0 2280804.0, 2280804.0 0.59
A/J m 1545465.0 103605.0   2   73260.0 0.067 1472205.0, 1618725.0 -0.66
AKR/J m 1195404.0 0.0   1   0.0 0.0 1195404.0, 1195404.0 -1.25
AXB10/PgnJ m 1308296.0 0.0   1   0.0 0.0 1308296.0, 1308296.0 -1.06
AXB12/PgnJ m 1936981.0 0.0   1   0.0 0.0 1936981.0, 1936981.0 0.01
AXB13/PgnJ m 1318154.0 0.0   1   0.0 0.0 1318154.0, 1318154.0 -1.04
AXB15/PgnJ m 1834057.0 0.0   1   0.0 0.0 1834057.0, 1834057.0 -0.17
AXB19a/PgnJ m 1686660.0 0.0   1   0.0 0.0 1686660.0, 1686660.0 -0.42
AXB19b/PgnJ m 1803959.0 296222.0   2   209460.0 0.164 1594498.0, 2013419.0 -0.22
AXB19/PgnJ m 2481234.0 0.0   1   0.0 0.0 2481234.0, 2481234.0 0.93
AXB1/PgnJ m 1727866.0 0.0   1   0.0 0.0 1727866.0, 1727866.0 -0.35
AXB23/PgnJ m 2268164.0 0.0   1   0.0 0.0 2268164.0, 2268164.0 0.57
AXB24/PgnJ m 2189957.0 646676.0   2   457269.0 0.295 1732688.0, 2647226.0 0.44
AXB2/PgnJ m 3022395.0 0.0   1   0.0 0.0 3022395.0, 3022395.0 1.85
AXB4/PgnJ m 2172687.0 0.0   1   0.0 0.0 2172687.0, 2172687.0 0.41
AXB5/PgnJ m 2118911.0 0.0   1   0.0 0.0 2118911.0, 2118911.0 0.32
AXB6/PgnJ m 2466079.0 0.0   1   0.0 0.0 2466079.0, 2466079.0 0.91
AXB8/PgnJ m 1695683.0 0.0   1   0.0 0.0 1695683.0, 1695683.0 -0.4
BALB/cJ m 2151117.0 137742.0   3 79525.0 0.064 2067257.0, 2310087.0 0.37
BTBR T+ Itpr3tf/J m 959701.0 0.0   1   0.0 0.0 959701.0, 959701.0 -1.65
BUB/BnJ m 2795675.0 0.0   1   0.0 0.0 2795675.0, 2795675.0 1.47
BXA11/PgnJ m 1856544.0 0.0   1   0.0 0.0 1856544.0, 1856544.0 -0.13
BXA12/PgnJ m 2736652.0 0.0   1   0.0 0.0 2736652.0, 2736652.0 1.37
BXA13/PgnJ m 1453357.0 0.0   1   0.0 0.0 1453357.0, 1453357.0 -0.81
BXA14/PgnJ m 1006031.0 0.0   1   0.0 0.0 1006031.0, 1006031.0 -1.57
BXA16/PgnJ m 1801396.0 333252.0   2   235645.0 0.185 1565750.0, 2037041.0 -0.22
BXA1/PgnJ m 2690688.0 0.0   1   0.0 0.0 2690688.0, 2690688.0 1.29
BXA24/PgnJ m 1556765.0 0.0   1   0.0 0.0 1556765.0, 1556765.0 -0.64
BXA25/PgnJ m 2560996.0 0.0   1   0.0 0.0 2560996.0, 2560996.0 1.07
BXA26/PgnJ m 2926497.0 0.0   1   0.0 0.0 2926497.0, 2926497.0 1.69
BXA2/PgnJ m 2016213.0 0.0   1   0.0 0.0 2016213.0, 2016213.0 0.14
BXA4/PgnJ m 1553086.0 0.0   1   0.0 0.0 1553086.0, 1553086.0 -0.64
BXA7/PgnJ m 1609014.0 0.0   1   0.0 0.0 1609014.0, 1609014.0 -0.55
BXA8/PgnJ m 2019256.0 0.0   1   0.0 0.0 2019256.0, 2019256.0 0.15
BXD11/TyJ m 1226140.0 0.0   1   0.0 0.0 1226140.0, 1226140.0 -1.2
BXD12/TyJ m 2025051.0 0.0   1   0.0 0.0 2025051.0, 2025051.0 0.16
BXD13/TyJ m 1595330.0 0.0   1   0.0 0.0 1595330.0, 1595330.0 -0.57
BXD14/TyJ m 1080819.0 0.0   1   0.0 0.0 1080819.0, 1080819.0 -1.45
BXD15/TyJ m 1164013.0 0.0   1   0.0 0.0 1164013.0, 1164013.0 -1.3
BXD18/TyJ m 2012210.0 0.0   1   0.0 0.0 2012210.0, 2012210.0 0.14
BXD19/TyJ m 1652301.0 17960.0   2   12700.0 0.0109 1639601.0, 1665001.0 -0.47
BXD1/TyJ m 2079796.0 0.0   1   0.0 0.0 2079796.0, 2079796.0 0.25
BXD20/TyJ m 1878798.0 0.0   1   0.0 0.0 1878798.0, 1878798.0 -0.09
BXD21/TyJ m 1721675.0 0.0   1   0.0 0.0 1721675.0, 1721675.0 -0.36
BXD22/TyJ m 1726473.0 0.0   1   0.0 0.0 1726473.0, 1726473.0 -0.35
BXD24/TyJ m 1625874.0 0.0   1   0.0 0.0 1625874.0, 1625874.0 -0.52
BXD24/TyJ-Cep290rd16/J m 953432.0 0.0   1   0.0 0.0 953432.0, 953432.0 -1.66
BXD28/TyJ m 1702368.0 189146.0   2   133746.0 0.111 1568622.0, 1836115.0 -0.39
BXD29-Tlr4lps-2J/J m 1844796.0 0.0   1   0.0 0.0 1844796.0, 1844796.0 -0.15
BXD2/TyJ m 2124139.0 0.0   1   0.0 0.0 2124139.0, 2124139.0 0.33
BXD32/TyJ m 2826027.0 0.0   1   0.0 0.0 2826027.0, 2826027.0 1.52
BXD33/TyJ m 972925.0 0.0   1   0.0 0.0 972925.0, 972925.0 -1.63
BXD34/TyJ m 1667740.0 0.0   1   0.0 0.0 1667740.0, 1667740.0 -0.45
BXD36/TyJ m 1332341.0 0.0   1   0.0 0.0 1332341.0, 1332341.0 -1.02
BXD38/TyJ m 2418298.0 0.0   1   0.0 0.0 2418298.0, 2418298.0 0.83
BXD39/TyJ m 2126524.0 0.0   1   0.0 0.0 2126524.0, 2126524.0 0.33
BXD40/TyJ m 1648378.0 0.0   1   0.0 0.0 1648378.0, 1648378.0 -0.48
BXD42/TyJ m 2128600.0 0.0   1   0.0 0.0 2128600.0, 2128600.0 0.33
BXD5/TyJ m 1718235.0 0.0   1   0.0 0.0 1718235.0, 1718235.0 -0.36
BXD6/TyJ m 1802921.0 0.0   1   0.0 0.0 1802921.0, 1802921.0 -0.22
BXD8/TyJ m 2468066.0 0.0   1   0.0 0.0 2468066.0, 2468066.0 0.91
BXD9/TyJ m 1716832.0 0.0   1   0.0 0.0 1716832.0, 1716832.0 -0.36
BXH10/TyJ m 1343269.0 0.0   1   0.0 0.0 1343269.0, 1343269.0 -1.0
BXH19/TyJ m 1580699.0 0.0   1   0.0 0.0 1580699.0, 1580699.0 -0.6
BXH20/KccJ m 1579910.0 0.0   1   0.0 0.0 1579910.0, 1579910.0 -0.6
BXH22/KccJ m 2822416.0 0.0   1   0.0 0.0 2822416.0, 2822416.0 1.51
BXH2/TyJ m 1724230.0 0.0   1   0.0 0.0 1724230.0, 1724230.0 -0.35
BXH4/TyJ m 1417508.0 91035.0   2   64371.0 0.0642 1353137.0, 1481880.0 -0.87
BXH6/TyJ m 1253564.0 0.0   1   0.0 0.0 1253564.0, 1253564.0 -1.15
BXH7/TyJ m 1305557.0 0.0   1   0.0 0.0 1305557.0, 1305557.0 -1.06
BXH8/TyJ m 1847171.0 0.0   1   0.0 0.0 1847171.0, 1847171.0 -0.14
BXH9/TyJ m 1937743.0 0.0   1   0.0 0.0 1937743.0, 1937743.0 0.01
C3H/HeJ m 1914775.0 1183252.0   2   836685.0 0.618 1078090.0, 2751461.0 -0.03
C57BL/6J m 2083846.0 435201.0   5 194628.0 0.209 1350199.0, 2415066.0 0.26
C57L/J m 3847005.0 0.0   1   0.0 0.0 3847005.0, 3847005.0 3.25
C58/J m 1952647.0 0.0   1   0.0 0.0 1952647.0, 1952647.0 0.04
CAST/EiJ m 980016.0 0.0   1   0.0 0.0 980016.0, 980016.0 -1.62
CBA/J m 2374318.0 0.0   1   0.0 0.0 2374318.0, 2374318.0 0.75
CE/J m 2395966.0 0.0   1   0.0 0.0 2395966.0, 2395966.0 0.79
CXB11/HiAJ m 1696841.0 402388.0   2   284531.0 0.237 1412310.0, 1981372.0 -0.4
CXB12/HiAJ m 2582702.0 777504.0   2   549778.0 0.301 2032924.0, 3132480.0 1.11
CXB13/HiAJ m 2230708.0 455840.0   3 263179.0 0.204 1717545.0, 2588720.0 0.51
CXB1/ByJ m 2600526.0 924274.0   3 533630.0 0.355 1550238.0, 3289848.0 1.14
CXB2/ByJ m 3321783.0 1055048.0   3 609132.0 0.318 2529767.0, 4519452.0 2.36
CXB3/ByJ m 2448991.0 715973.0   2   506270.0 0.292 1942722.0, 2955261.0 0.88
CXB4/ByJ m 1765054.0 541827.0   2   383130.0 0.307 1381924.0, 2148184.0 -0.28
CXB6/ByJ m 1960041.0 1116676.0   3 644713.0 0.57 1296758.0, 3249288.0 0.05
CXB7/ByJ m 2018320.0 137744.0   2   97400.0 0.0682 1920920.0, 2115720.0 0.15
CXB8/HiAJ m 2786820.0 815565.0   3 470867.0 0.293 2238581.0, 3724055.0 1.45
CXB9/HiAJ m 3537674.0 2117083.0   3 1222298.0 0.598 2250938.0, 5981118.0 2.73
DBA/2J m 1603711.0 342080.0   4 171040.0 0.213 1123555.0, 1859947.0 -0.56
FVB/NJ m 1871695.0 0.0   1   0.0 0.0 1871695.0, 1871695.0 -0.1
I/LnJ m 1677881.0 0.0   1   0.0 0.0 1677881.0, 1677881.0 -0.43
KK/HlJ m 4006314.0 0.0   1   0.0 0.0 4006314.0, 4006314.0 3.53
LG/J m 980474.0 0.0   1   0.0 0.0 980474.0, 980474.0 -1.62
LP/J m 1789762.0 0.0   1   0.0 0.0 1789762.0, 1789762.0 -0.24
MA/MyJ m 1715892.0 0.0   1   0.0 0.0 1715892.0, 1715892.0 -0.37
NOD/ShiLtJ m 1768119.0 0.0   1   0.0 0.0 1768119.0, 1768119.0 -0.28
NON/ShiLtJ m 1063298.0 0.0   1   0.0 0.0 1063298.0, 1063298.0 -1.48
NZW/LacJ m 1926729.0 0.0   1   0.0 0.0 1926729.0, 1926729.0 -0.01
PL/J m 1731463.0 0.0   1   0.0 0.0 1731463.0, 1731463.0 -0.34
RIIIS/J m 1725790.0 0.0   1   0.0 0.0 1725790.0, 1725790.0 -0.35
SEA/GnJ m 1831502.0 0.0   1   0.0 0.0 1831502.0, 1831502.0 -0.17
SJL/J m 1825092.0 0.0   1   0.0 0.0 1825092.0, 1825092.0 -0.18
SM/J m 1869321.0 0.0   1   0.0 0.0 1869321.0, 1869321.0 -0.11
SWR/J m 2063230.0 0.0   1   0.0 0.0 2063230.0, 2063230.0 0.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1545464.95 568138.0026 2700060.2864 390869.6136
AXB19b/PgnJ m 1803958.65 568138.0026 2958553.9864 649363.3136
AXB24/PgnJ m 2189957.05 568138.0026 3344552.3864 1035361.7136
BALB/cJ m 2151116.6 463882.7366 3093839.7445 1208393.4555
BXA16/PgnJ m 1801395.5 568138.0026 2955990.8364 646800.1636
BXD19/TyJ m 1652301.15 568138.0026 2806896.4864 497705.8136
BXD28/TyJ m 1702368.5 568138.0026 2856963.8364 547773.1636
BXH4/TyJ m 1417508.2 568138.0026 2572103.5364 262912.8636
C3H/HeJ m 1914775.35 568138.0026 3069370.6864 760180.0136
C57BL/6J m 2083845.86 359322.0227 2814076.0678 1353615.6522
CXB11/HiAJ m 1696841.05 568138.0026 2851436.3864 542245.7136
CXB12/HiAJ m 2582702.45 568138.0026 3737297.7864 1428107.1136
CXB13/HiAJ m 2230707.5 463882.7366 3173430.6445 1287984.3555
CXB1/ByJ m 2600525.6 463882.7366 3543248.7445 1657802.4555
CXB2/ByJ m 3321783.1 463882.7366 4264506.2445 2379059.9555
CXB3/ByJ m 2448991.3 568138.0026 3603586.6364 1294395.9636
CXB4/ByJ m 1765054.2 568138.0026 2919649.5364 610458.8636
CXB6/ByJ m 1960041.3667 463882.7366 2902764.5112 1017318.2222
CXB7/ByJ m 2018320.05 568138.0026 3172915.3864 863724.7136
CXB8/HiAJ m 2786819.9333 463882.7366 3729543.0778 1844096.7888
CXB9/HiAJ m 3537674.1 463882.7366 4480397.2445 2594950.9555
DBA/2J m 1603710.675 401734.2343 2420132.8669 787288.4831




  GWAS USING LINEAR MIXED MODELS