Project measure / variable:   Jentsch2   activity_20

ID, description, units MPD:49735   activity_20   horizontal beam breaks   [n]  20 mg/kg  
cocaine study
Data set, strains Jentsch2   BXD   4 strains     sex: f     age: 8-17wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Jentsch2 - horizontal beam breaks 20 mg/kg



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested4 strains
Mean of the strain means143   n
Median of the strain means134   n
SD of the strain means± 53.7
Coefficient of variation (CV)0.376
Min–max range of strain means96.0   –   207   n
Mean sample size per strain12.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 71892.0033 23964.0011 8.5239 0.0001
Residuals 47 132134.7759 2811.3782


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD31/TyJ f 96.0 41.4   10 13.1 0.431 28.1, 146.0 -0.87
BXD38/TyJ f 101.0 36.2   24 7.38 0.357 40.5, 172.0 -0.78
BXD42/TyJ f 167.0 81.1   13 22.5 0.485 84.4, 299.0 0.45
BXD68/RwwJ f 207.0 50.4   4 25.2 0.243 162.0, 265.0 1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD31/TyJ f 95.984 16.7672 129.7152 62.2528
BXD38/TyJ f 101.2829 10.8232 123.0563 79.5095
BXD42/TyJ f 167.1462 14.7058 196.7304 137.5619
BXD68/RwwJ f 206.985 26.5112 260.3187 153.6513




GWAS analysis not available: SNP data is not available for enough strains (at least 4)