Project measure / variable:   Rice1   Krt81

ID, description, units MPD:49224   Krt81   KRT81, spectral counts, hair proteomics    
Data set, strains Rice1   inbred   11 strains     sex: both     age: 10-19wks
Procedure proteomic profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rice1 - KRT81, spectral counts, hair proteomics



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means675   None 664   None
Median of the strain means691   None 724   None
SD of the strain means± 190 ± 211
Coefficient of variation (CV)0.282 0.317
Min–max range of strain means157   –   904   None 157   –   917   None
Mean sample size per strain2.0   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1298.8673 1298.8673 0.147 0.7051
strain 10 1530866.3975 153086.6398 17.3273 < 0.0001
sex:strain 10 80052.5208 8005.2521 0.9061 0.5441
Residuals 22 194369.6188 8834.9827


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C3H/HeJ f 157.0 13.2   2   9.32 0.0842 147.0, 166.0 -2.72
C3H/HeJ m 157.0 29.6   2   20.9 0.188 136.0, 178.0 -2.41
C57BL/6J f 672.0 23.9   2   16.9 0.0355 655.0, 688.0 -0.02
C57BL/6J m 693.0 18.2   2   12.9 0.0262 681.0, 706.0 0.14
CAST/EiJ f 691.0 20.8   2   14.7 0.0301 676.0, 705.0 0.08
CAST/EiJ m 704.0 8.17   2   5.78 0.0116 698.0, 710.0 0.19
DBA/1J f 716.0 3.15   2   2.22 0.0044 713.0, 718.0 0.22
DBA/1J m 740.0 19.1   2   13.5 0.0258 727.0, 754.0 0.36
MRL/MpJ f 782.0 40.4   2   28.5 0.0516 753.0, 810.0 0.56
MRL/MpJ m 718.0 36.5   2   25.8 0.0508 692.0, 744.0 0.26
MRL/MpJ Faslpr-Foxq1sa-J/J f 904.0 35.4   2   25.0 0.0392 879.0, 929.0 1.2
MRL/MpJ Faslpr-Foxq1sa-J/J m 917.0 4.29   2   3.03 0.00467 914.0, 920.0 1.2
NOD/ShiLtJ f 781.0 30.2   2   21.4 0.0387 760.0, 803.0 0.56
NOD/ShiLtJ m 788.0 41.1   2   29.1 0.0522 759.0, 818.0 0.59
NZW/LacJ f 646.0 2.1   2   1.48 0.00325 645.0, 648.0 -0.15
NZW/LacJ m 724.0 41.8   2   29.6 0.0578 694.0, 753.0 0.29
SB/LeJ f 789.0 61.8   2   43.7 0.0783 745.0, 833.0 0.6
SB/LeJ m 742.0 16.2   2   11.5 0.0219 730.0, 753.0 0.37
STOCK a/a Tmem79ma Flgft/J f 660.0 6.68   2   4.73 0.0101 655.0, 665.0 -0.08
STOCK a/a Tmem79ma Flgft/J m 740.0 46.3   2   32.8 0.0626 707.0, 772.0 0.36
WSB/EiJ f 627.0 78.1   2   55.2 0.125 572.0, 683.0 -0.25
WSB/EiJ m 380.0 413.0   2   292.0 1.09 88.0, 672.0 -1.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeJ f 156.501 66.4642 294.3393 18.6627
C3H/HeJ m 157.381 66.4642 295.2193 19.5427
C57BL/6J f 671.5735 66.4642 809.4118 533.7352
C57BL/6J m 693.467 66.4642 831.3053 555.6287
CAST/EiJ f 690.7485 66.4642 828.5868 552.9102
CAST/EiJ m 703.91 66.4642 841.7483 566.0717
DBA/1J f 715.6605 66.4642 853.4988 577.8222
DBA/1J m 740.1835 66.4642 878.0218 602.3452
MRL/MpJ f 781.5905 66.4642 919.4288 643.7522
MRL/MpJ m 717.965 66.4642 855.8033 580.1267
MRL/MpJ Faslpr-Foxq1sa-J/J f 903.6625 66.4642 1041.5008 765.8242
MRL/MpJ Faslpr-Foxq1sa-J/J m 917.2305 66.4642 1055.0688 779.3922
NOD/ShiLtJ f 781.265 66.4642 919.1033 643.4267
NOD/ShiLtJ m 788.4385 66.4642 926.2768 650.6002
NZW/LacJ f 646.0245 66.4642 783.8628 508.1862
NZW/LacJ m 723.686 66.4642 861.5243 585.8477
SB/LeJ f 789.0215 66.4642 926.8598 651.1832
SB/LeJ m 741.7865 66.4642 879.6248 603.9482
STOCK a/a Tmem79ma Flgft/J f 659.788 66.4642 797.6263 521.9497
STOCK a/a Tmem79ma Flgft/J m 739.603 66.4642 877.4413 601.7647
WSB/EiJ f 627.366 66.4642 765.2043 489.5277
WSB/EiJ m 380.02 66.4642 517.8583 242.1817


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeJ both 156.941 46.9973 254.4074 59.4746
C57BL/6J both 682.5203 46.9973 779.9867 585.0538
CAST/EiJ both 697.3293 46.9973 794.7957 599.8628
DBA/1J both 727.922 46.9973 825.3884 630.4556
MRL/MpJ both 749.7777 46.9973 847.2442 652.3113
MRL/MpJ Faslpr-Foxq1sa-J/J both 910.4465 46.9973 1007.9129 812.9801
NOD/ShiLtJ both 784.8517 46.9973 882.3182 687.3853
NZW/LacJ both 684.8552 46.9973 782.3217 587.3888
SB/LeJ both 765.404 46.9973 862.8704 667.9376
STOCK a/a Tmem79ma Flgft/J both 699.6955 46.9973 797.1619 602.2291
WSB/EiJ both 503.693 46.9973 601.1594 406.2266




  GWAS USING LINEAR MIXED MODELS