Project measure / variable:   Harrill1   spleen_ctrl

ID, description, units MPD:39511   spleen_ctrl   spleen weight   [g]  control  
isoniazid study
Data set, strains Harrill1   inbred   34 strains     sex: f     age: 8-10wks
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Harrill1 - spleen weight control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means0.0640   g
Median of the strain means0.0669   g
SD of the strain means± 0.0248
Coefficient of variation (CV)0.387
Min–max range of strain means0.0127   –   0.120   g
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 0.0812 0.0025 22.29 < 0.0001
Residuals 102 0.0113 0.0001


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.036 0.011   4 0.00548 0.304 0.028, 0.052 -1.13
A/J f 0.0435 0.009   4 0.0045 0.207 0.036, 0.054 -0.83
AKR/J f 0.0715 0.0101   4 0.00504 0.141 0.061, 0.082 0.3
BALB/cJ f 0.0745 0.00661   4 0.0033 0.0887 0.07, 0.084 0.42
BTBR T+ Itpr3tf/J f 0.0578 0.00768   4 0.00384 0.133 0.049, 0.066 -0.25
BUB/BnJ f 0.102 0.00981   4 0.00491 0.0958 0.091, 0.115 1.53
C3H/HeJ f 0.0785 0.0058   4 0.0029 0.0739 0.072, 0.086 0.58
C57BL/6J f 0.0523 0.00645   4 0.00322 0.123 0.046, 0.06 -0.47
C57BLKS/J f 0.0795 0.00332   4 0.00166 0.0417 0.075, 0.083 0.62
C57BR/cdJ f 0.069 0.0129   4 0.00647 0.187 0.052, 0.083 0.2
C58/J f 0.0678 0.0108   4 0.00541 0.16 0.053, 0.078 0.15
CBA/J f 0.0633 0.0137   4 0.00687 0.217 0.05, 0.082 -0.03
CE/J f 0.0417 0.00519   4 0.00259 0.124 0.034, 0.045 -0.9
DBA/2J f 0.0795 0.00835   4 0.00417 0.105 0.067, 0.084 0.62
FVB/NJ f 0.0742 0.0034   4 0.0017 0.0458 0.071, 0.079 0.41
I/LnJ f 0.066 0.00906   4 0.00453 0.137 0.056, 0.078 0.08
KK/HlJ f 0.0835 0.00493   4 0.00247 0.0591 0.077, 0.089 0.79
LG/J f 0.12 0.0201   4 0.0101 0.168 0.097, 0.141 2.26
LP/J f 0.024 0.00392   4 0.00196 0.163 0.02, 0.029 -1.62
MA/MyJ f 0.0295 0.00289   4 0.00144 0.0979 0.026, 0.033 -1.39
MRL/MpJ f 0.099 0.023   4 0.0115 0.232 0.085, 0.133 1.41
NOD/ShiLtJ f 0.0742 0.00846   4 0.00423 0.114 0.065, 0.085 0.41
NON/ShiLtJ f 0.0615 0.0108   4 0.00539 0.175 0.046, 0.071 -0.1
NOR/LtJ f 0.0622 0.0136   4 0.0068 0.218 0.043, 0.075 -0.07
NZW/LacJ f 0.0832 0.0129   4 0.00647 0.156 0.068, 0.094 0.77
P/J f 0.055 0.0104   4 0.00518 0.188 0.045, 0.069 -0.36
PL/J f 0.0333 0.00465   4 0.00232 0.14 0.029, 0.039 -1.24
PWK/PhJ f 0.0325 0.00545   4 0.00272 0.168 0.025, 0.037 -1.27
RIIIS/J f 0.034 0.00271   4 0.00135 0.0796 0.03, 0.036 -1.21
SEA/GnJ f 0.0998 0.0155   4 0.00775 0.155 0.092, 0.123 1.44
SJL/J f 0.0915 0.0117   4 0.00584 0.128 0.076, 0.101 1.11
SM/J f 0.0493 0.00386   4 0.00193 0.0784 0.044, 0.053 -0.59
SWR/J f 0.0752 0.0193   4 0.00965 0.256 0.059, 0.101 0.45
WSB/EiJ f 0.0127 0.00723   4 0.00361 0.567 0.006, 0.023 -2.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.036 0.0053 0.0464 0.0256
A/J f 0.0435 0.0053 0.0539 0.0331
AKR/J f 0.0715 0.0053 0.0819 0.0611
BALB/cJ f 0.0745 0.0053 0.0849 0.0641
BTBR T+ Itpr3tf/J f 0.0577 0.0053 0.0682 0.0473
BUB/BnJ f 0.1025 0.0053 0.1129 0.0921
C3H/HeJ f 0.0785 0.0053 0.0889 0.0681
C57BL/6J f 0.0522 0.0053 0.0627 0.0418
C57BLKS/J f 0.0795 0.0053 0.0899 0.0691
C57BR/cdJ f 0.069 0.0053 0.0794 0.0586
C58/J f 0.0677 0.0053 0.0782 0.0573
CBA/J f 0.0632 0.0053 0.0737 0.0528
CE/J f 0.0417 0.0053 0.0522 0.0313
DBA/2J f 0.0795 0.0053 0.0899 0.0691
FVB/NJ f 0.0742 0.0053 0.0847 0.0638
I/LnJ f 0.066 0.0053 0.0764 0.0556
KK/HlJ f 0.0835 0.0053 0.0939 0.0731
LG/J f 0.12 0.0053 0.1304 0.1096
LP/J f 0.024 0.0053 0.0344 0.0136
MA/MyJ f 0.0295 0.0053 0.0399 0.0191
MRL/MpJ f 0.099 0.0053 0.1094 0.0886
NOD/ShiLtJ f 0.0742 0.0053 0.0847 0.0638
NON/ShiLtJ f 0.0615 0.0053 0.0719 0.0511
NOR/LtJ f 0.0622 0.0053 0.0727 0.0518
NZW/LacJ f 0.0832 0.0053 0.0937 0.0728
P/J f 0.055 0.0053 0.0654 0.0446
PL/J f 0.0332 0.0053 0.0437 0.0228
PWK/PhJ f 0.0325 0.0053 0.0429 0.0221
RIIIS/J f 0.034 0.0053 0.0444 0.0236
SEA/GnJ f 0.0997 0.0053 0.1102 0.0893
SJL/J f 0.0915 0.0053 0.1019 0.0811
SM/J f 0.0492 0.0053 0.0597 0.0388
SWR/J f 0.0752 0.0053 0.0857 0.0648
WSB/EiJ f 0.0127 0.0053 0.0232 0.0023




  GWAS USING LINEAR MIXED MODELS