Project measure / variable:   Crowley1   tongue_d120

ID, description, units MPD:39432   tongue_d120   tongue protrusions, 15 min test   [n]  on day 120  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   26 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - tongue protrusions, 15 min test on day 120



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested26 strains
Mean of the strain means14.3   n
Median of the strain means6.40   n
SD of the strain means± 22.0
Coefficient of variation (CV)1.53
Min–max range of strain means0   –   81.9   n
Mean sample size per strain5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 25 87210.2708 3488.4108 5.8404 < 0.0001
Residuals 122 72869.0536 597.2873


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.125 0.354   8 0.125 2.83 -0.65
A/J m 14.2 23.0   5 10.3 1.62 -0.01
AKR/J m 6.8 4.15   5 1.85 0.61 3.0, 13.0 -0.34
BALB/cByJ m 10.5 10.8   4 5.39 1.03 1.0, 23.0 -0.17
BTBR T+ Itpr3tf/J m 0.0 0.0   8 0.0 0.0 -0.65
C3H/HeJ m 20.2 25.9   4 12.9 1.28 0.27
C57BL/6J m 4.6 4.77   5 2.14 1.04 -0.44
C57BLKS/J m 2.2 2.17   5 0.97 0.985 -0.55
CAST/EiJ m 30.8 15.6   5 6.99 0.507 13.0, 50.0 0.75
CBA/J m 1.4 1.67   5 0.748 1.2 -0.59
DBA/2J m 78.3 61.8   9 20.6 0.789 10.0, 196.0 2.91
DDY/JclSidSeyFrkJ m 1.71 1.98   7 0.747 1.15 -0.57
FVB/NJ m 6.0 6.96   5 3.11 1.16 -0.38
KK/HlJ m 1.29 2.56   7 0.969 1.99 -0.59
MA/MyJ m 9.0 10.6   6 4.31 1.17 1.0, 24.0 -0.24
MOLF/EiJ m 13.4 1.95   5 0.872 0.145 12.0, 16.0 -0.04
MRL/MpJ m 1.6 1.52   5 0.678 0.948 -0.58
MSM/MsJ m 9.0 10.2   5 4.58 1.14 -0.24
NOD/ShiLtJ m 8.2 8.7   5 3.89 1.06 -0.28
NON/ShiLtJ m 81.9 69.8   7 26.4 0.853 2.0, 203.0 3.08
NZL/LtJ m 2.43 2.57   7 0.972 1.06 -0.54
NZO/HlLtJ m 4.25 3.5   4 1.75 0.824 -0.46
NZW/LacJ m 0.0 0.0   5 0.0 0.0 -0.65
PWK/PhJ m 44.6 31.9   5 14.3 0.715 19.0, 99.0 1.38
SJL/J m 1.75 1.71   4 0.854 0.976 -0.57
SM/J m 18.2 15.6   8 5.53 0.856 0.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.125 8.6407 17.23 -16.98
A/J m 14.2 10.9297 35.8364 -7.4364
AKR/J m 6.8 10.9297 28.4364 -14.8364
BALB/cByJ m 10.5 12.2197 34.6902 -13.6902
BTBR T+ Itpr3tf/J m 0.0 8.6407 17.105 -17.105
C3H/HeJ m 20.25 12.2197 44.4402 -3.9402
C57BL/6J m 4.6 10.9297 26.2364 -17.0364
C57BLKS/J m 2.2 10.9297 23.8364 -19.4364
CAST/EiJ m 30.8 10.9297 52.4364 9.1636
CBA/J m 1.4 10.9297 23.0364 -20.2364
DBA/2J m 78.3333 8.1465 94.4601 62.2065
DDY/JclSidSeyFrkJ m 1.7143 9.2372 20.0003 -16.5718
FVB/NJ m 6.0 10.9297 27.6364 -15.6364
KK/HlJ m 1.2857 9.2372 19.5718 -17.0003
MA/MyJ m 9.0 9.9774 28.7512 -10.7512
MOLF/EiJ m 13.4 10.9297 35.0364 -8.2364
MRL/MpJ m 1.6 10.9297 23.2364 -20.0364
MSM/MsJ m 9.0 10.9297 30.6364 -12.6364
NOD/ShiLtJ m 8.2 10.9297 29.8364 -13.4364
NON/ShiLtJ m 81.8571 9.2372 100.1432 63.5711
NZL/LtJ m 2.4286 9.2372 20.7146 -15.8575
NZO/HlLtJ m 4.25 12.2197 28.4402 -19.9402
NZW/LacJ m 0.0 10.9297 21.6364 -21.6364
PWK/PhJ m 44.6 10.9297 66.2364 22.9636
SJL/J m 1.75 12.2197 25.9402 -22.4402
SM/J m 18.25 8.6407 35.355 1.145




  GWAS USING LINEAR MIXED MODELS