Project measure / variable:   Gupta2   kidneys

ID, description, units MPD:39204   kidneys   kidney weight   [g]  both  
Data set, strains Gupta2   BXH   10 strains     sex: both     age: postnatal d1
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Gupta2 - kidney weight both



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.0130   g 0.0136   g
Median of the strain means0.0129   g 0.0134   g
SD of the strain means± 0.00106 ± 0.00129
Coefficient of variation (CV)0.0813 0.0952
Min–max range of strain means0.0115   –   0.0147   g 0.0113   –   0.0155   g
Mean sample size per strain12.9   mice 14.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0 0.0 3.4446 0.0646
strain 9 0.0003 0.0 4.8559 < 0.0001
sex:strain 9 0.0 0.0 0.5141 0.8638
Residuals 254 0.0016 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXH10/TyJ f 0.0134 0.00104   13 0.000289 0.078 0.0111, 0.0151 0.36
BXH10/TyJ m 0.0136 0.0028   14 0.000749 0.207 0.0084, 0.0198 0.03
BXH11/TyJ f 0.013 0.00256   7 0.000968 0.198 0.0092, 0.0149 -0.02
BXH11/TyJ m 0.0155 0.00159   6 0.00065 0.103 0.0129, 0.0173 1.5
BXH14/TyJ f 0.012 0.00292   15 0.000754 0.244 0.0059, 0.0192 -0.96
BXH14/TyJ m 0.0131 0.0022   16 0.000551 0.169 0.0077, 0.017 -0.36
BXH19/TyJ f 0.0115 0.00172   23 0.00036 0.15 0.0084, 0.015 -1.44
BXH19/TyJ m 0.0113 0.000986   11 0.000297 0.0872 0.0093, 0.0125 -1.75
BXH2/TyJ f 0.0141 0.00353   8 0.00125 0.249 0.0106, 0.0189 1.02
BXH2/TyJ m 0.0149 0.00388   12 0.00112 0.261 0.0093, 0.0214 1.04
BXH4/TyJ f 0.0147 0.00381   15 0.000984 0.26 0.0105, 0.025 1.59
BXH4/TyJ m 0.015 0.00278   11 0.000837 0.185 0.0109, 0.0195 1.12
BXH6/TyJ f 0.0127 0.00192   15 0.000496 0.151 0.0095, 0.0153 -0.3
BXH6/TyJ m 0.0127 0.00226   15 0.000584 0.178 0.0075, 0.0165 -0.67
BXH7/TyJ f 0.0121 0.00277   9 0.000922 0.228 0.009, 0.0167 -0.87
BXH7/TyJ m 0.0125 0.00334   16 0.000836 0.268 0.0073, 0.0175 -0.82
BXH8/TyJ f 0.0142 0.00275   10 0.00087 0.194 0.0109, 0.0188 1.11
BXH8/TyJ m 0.0138 0.0026   19 0.000597 0.189 0.0067, 0.0169 0.19
BXH9/TyJ f 0.0125 0.00142   18 0.000334 0.114 0.009, 0.0144 -0.49
BXH9/TyJ m 0.0132 0.00161   21 0.00035 0.122 0.0107, 0.0166 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ f 0.0134 0.0007 0.0147 0.012
BXH10/TyJ m 0.0136 0.0007 0.0149 0.0122
BXH11/TyJ f 0.013 0.0009 0.0148 0.0111
BXH11/TyJ m 0.0155 0.001 0.0175 0.0135
BXH14/TyJ f 0.012 0.0006 0.0132 0.0107
BXH14/TyJ m 0.0131 0.0006 0.0143 0.0118
BXH19/TyJ f 0.0115 0.0005 0.0125 0.0105
BXH19/TyJ m 0.0113 0.0008 0.0128 0.0098
BXH2/TyJ f 0.0141 0.0009 0.0159 0.0124
BXH2/TyJ m 0.0149 0.0007 0.0163 0.0135
BXH4/TyJ f 0.0147 0.0006 0.0159 0.0134
BXH4/TyJ m 0.015 0.0008 0.0165 0.0135
BXH6/TyJ f 0.0127 0.0006 0.014 0.0115
BXH6/TyJ m 0.0127 0.0006 0.014 0.0114
BXH7/TyJ f 0.0121 0.0008 0.0138 0.0105
BXH7/TyJ m 0.0125 0.0006 0.0137 0.0112
BXH8/TyJ f 0.0142 0.0008 0.0158 0.0126
BXH8/TyJ m 0.0138 0.0006 0.0149 0.0127
BXH9/TyJ f 0.0125 0.0006 0.0136 0.0113
BXH9/TyJ m 0.0132 0.0005 0.0143 0.0121


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ both 0.0135 0.0005 0.0144 0.0125
BXH11/TyJ both 0.0142 0.0007 0.0156 0.0129
BXH14/TyJ both 0.0125 0.0005 0.0134 0.0116
BXH19/TyJ both 0.0114 0.0005 0.0123 0.0105
BXH2/TyJ both 0.0145 0.0006 0.0156 0.0134
BXH4/TyJ both 0.0148 0.0005 0.0158 0.0139
BXH6/TyJ both 0.0127 0.0005 0.0136 0.0118
BXH7/TyJ both 0.0123 0.0005 0.0133 0.0113
BXH8/TyJ both 0.014 0.0005 0.015 0.013
BXH9/TyJ both 0.0128 0.0004 0.0136 0.012




  GWAS USING LINEAR MIXED MODELS