Project measure / variable:   Koide3   face_washing

ID, description, units MPD:35912   face_washing   scrubbing face with forelimbs not followed by grooming, presence or absence of activity in 5s intervals over 10 min test   [n]  
Data set, strains Koide3   wild-derived Mishima   12 strains     sex: both     age: 10wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Koide3 - scrubbing face with forelimbs not followed by grooming, presence or absence of activity in 5s intervals over 10 min test

BLG2/MsHMI/MsBFM/2MsSWN/MsPGN2/MsC57BL/6JCAST/EiJCHD/MsJF1/MsJNJL/MsKJR/MsMSM/MsJ n 0510152025femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means5.83   n 6.65   n
Median of the strain means5.25   n 5.20   n
SD of the strain means± 2.72 ± 3.29
Coefficient of variation (CV)0.466 0.495
Min–max range of strain means3.50   –   12.6   n 3.50   –   14.3   n
Mean sample size per strain10.0   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 40.0167 40.0167 2.9579 0.0869
strain 11 1934.7833 175.8894 13.0012 < 0.0001
sex:strain 11 66.9833 6.0894 0.4501 0.9313
Residuals 216 2922.2 13.5287


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 24 (24)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BFM/2Ms f 7.3 5.01   10 1.58 0.687 0.54
BFM/2Ms m 8.9 3.7   10 1.17 0.415 4.0, 14.0 0.68
BLG2/Ms f 12.6 6.1   10 1.93 0.484 4.0, 26.0 2.49
BLG2/Ms m 14.3 6.34   10 2.01 0.444 6.0, 23.0 2.33
C57BL/6J f 5.5 3.84   10 1.21 0.698 2.0, 12.0 -0.12
C57BL/6J m 5.1 3.9   10 1.23 0.765 1.0, 12.0 -0.47
CAST/EiJ f 5.0 2.36   10 0.745 0.471 1.0, 9.0 -0.31
CAST/EiJ m 4.4 2.01   10 0.636 0.457 1.0, 7.0 -0.68
CHD/Ms f 3.6 3.47   10 1.1 0.964 -0.82
CHD/Ms m 5.3 3.95   10 1.25 0.744 -0.41
HMI/Ms f 9.1 3.75   10 1.19 0.413 1.0, 13.0 1.2
HMI/Ms m 10.0 3.43   10 1.09 0.343 5.0, 13.0 1.02
JF1/MsJ f 4.4 3.13   10 0.991 0.712 -0.53
JF1/MsJ m 4.1 2.23   10 0.706 0.545 1.0, 8.0 -0.78
KJR/Ms f 3.8 2.04   10 0.646 0.538 1.0, 7.0 -0.75
KJR/Ms m 3.5 3.21   10 1.01 0.916 -0.96
MSM/MsJ f 3.6 2.59   10 0.819 0.72 -0.82
MSM/MsJ m 3.7 2.0   10 0.633 0.541 -0.9
NJL/Ms f 3.5 2.64   10 0.833 0.753 1.0, 10.0 -0.86
NJL/Ms m 4.3 2.91   10 0.92 0.676 2.0, 11.0 -0.71
PGN2/Ms f 5.5 3.75   10 1.19 0.682 1.0, 12.0 -0.12
PGN2/Ms m 8.2 3.65   10 1.15 0.445 4.0, 14.0 0.47
SWN/Ms f 6.1 3.0   10 0.948 0.491 2.0, 11.0 0.1
SWN/Ms m 8.0 4.88   10 1.54 0.61 2.0, 17.0 0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms f 7.3 1.1631 9.5925 5.0075
BFM/2Ms m 8.9 1.1631 11.1925 6.6075
BLG2/Ms f 12.6 1.1631 14.8925 10.3075
BLG2/Ms m 14.3 1.1631 16.5925 12.0075
C57BL/6J f 5.5 1.1631 7.7925 3.2075
C57BL/6J m 5.1 1.1631 7.3925 2.8075
CAST/EiJ f 5.0 1.1631 7.2925 2.7075
CAST/EiJ m 4.4 1.1631 6.6925 2.1075
CHD/Ms f 3.6 1.1631 5.8925 1.3075
CHD/Ms m 5.3 1.1631 7.5925 3.0075
HMI/Ms f 9.1 1.1631 11.3925 6.8075
HMI/Ms m 10.0 1.1631 12.2925 7.7075
JF1/MsJ f 4.4 1.1631 6.6925 2.1075
JF1/MsJ m 4.1 1.1631 6.3925 1.8075
KJR/Ms f 3.8 1.1631 6.0925 1.5075
KJR/Ms m 3.5 1.1631 5.7925 1.2075
MSM/MsJ f 3.6 1.1631 5.8925 1.3075
MSM/MsJ m 3.7 1.1631 5.9925 1.4075
NJL/Ms f 3.5 1.1631 5.7925 1.2075
NJL/Ms m 4.3 1.1631 6.5925 2.0075
PGN2/Ms f 5.5 1.1631 7.7925 3.2075
PGN2/Ms m 8.2 1.1631 10.4925 5.9075
SWN/Ms f 6.1 1.1631 8.3925 3.8075
SWN/Ms m 8.0 1.1631 10.2925 5.7075


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BFM/2Ms both 8.1 0.8225 9.7211 6.4789
BLG2/Ms both 13.45 0.8225 15.0711 11.8289
C57BL/6J both 5.3 0.8225 6.9211 3.6789
CAST/EiJ both 4.7 0.8225 6.3211 3.0789
CHD/Ms both 4.45 0.8225 6.0711 2.8289
HMI/Ms both 9.55 0.8225 11.1711 7.9289
JF1/MsJ both 4.25 0.8225 5.8711 2.6289
KJR/Ms both 3.65 0.8225 5.2711 2.0289
MSM/MsJ both 3.65 0.8225 5.2711 2.0289
NJL/Ms both 3.9 0.8225 5.5211 2.2789
PGN2/Ms both 6.85 0.8225 8.4711 5.2289
SWN/Ms both 7.05 0.8225 8.6711 5.4289




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA