Project measure / variable:   Jaxpheno7   visual_placing

ID, description, units MPD:34934   visual_placing   forelimb extension towards horizontal wire-grid when lowered by tail (score 0-3)   [score]  
Data set, strains Jaxpheno7   inbred   6 strains     sex: m     age: 10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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Jaxpheno7 - forelimb extension towards horizontal wire-grid when lowered by tail (score 0-3)

AKR/JA/JBALB/cJC57BL/6JDBA/2JC3H/HeJ score 1.01.21.41.61.82.02.22.42.62.83.0femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means2.00   score
Median of the strain means2.00   score
SD of the strain means± 0.111
Coefficient of variation (CV)0.0553
Min–max range of strain means1.83   –   2.18   score
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 0.5107 0.1021 1.8611 0.1202
Residuals 45 2.4697 0.0549


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
A/J m 2.0 0.0   6 0.0 0.0 2.0, 2.0 -0.02
AKR/J m 2.18 0.405   11 0.122 0.185 2.0, 3.0 1.61
BALB/cJ m 2.0 0.0   11 0.0 0.0 2.0, 2.0 -0.02
C3H/HeJ m 1.83 0.408   6 0.167 0.223 1.0, 2.0 -1.55
C57BL/6J m 2.0 0.0   6 0.0 0.0 2.0, 2.0 -0.02
DBA/2J m 2.0 0.0   11 0.0 0.0 2.0, 2.0 -0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 2.0 0.0956 2.1926 1.8074
AKR/J m 2.1818 0.0706 2.3241 2.0396
BALB/cJ m 2.0 0.0706 2.1423 1.8577
C3H/HeJ m 1.8333 0.0956 2.026 1.6407
C57BL/6J m 2.0 0.0956 2.1926 1.8074
DBA/2J m 2.0 0.0706 2.1423 1.8577




  GWAS USING LINEAR MIXED MODELS

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