Project measure / variable:   Schalkwyk1   dur_open_EPM

ID, description, units MPD:34511   dur_open_EPM   duration in open arms, 5 min test   [s]  
Data set, strains Schalkwyk1   inbred   8 strains     sex: m     age: 9-11wks
Procedure elevated plus maze
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  STRAIN COMPARISON PLOT
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Schalkwyk1 - duration in open arms, 5 min test

129S1/SvImJC57BL/6JC3H/HeJSJL/JFVB/NJDBA/2JBALB/cByJA/J s 020406080100120140160180femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means38.4   s
Median of the strain means29.0   s
SD of the strain means± 28.5
Coefficient of variation (CV)0.744
Min–max range of strain means1.31   –   88.1   s
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 62577.6851 8939.6693 6.8189 < 0.0001
Residuals 78 102259.3065 1311.0168


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 88.1 54.5   11 16.4 0.618 2.23, 149.0 1.74
A/J m 1.31 4.34   11 1.31 3.32 -1.3
BALB/cByJ m 20.3 42.9   11 12.9 2.12 -0.63
C3H/HeJ m 47.5 59.3   9 19.8 1.25 0.32
C57BL/6J m 69.8 28.8   11 8.68 0.412 6.27, 107.0 1.1
DBA/2J m 21.7 21.5   11 6.48 0.992 -0.58
FVB/NJ m 27.7 14.8   11 4.47 0.535 5.81, 52.1 -0.37
SJL/J m 30.4 32.7   11 9.86 1.08 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 88.1009 10.9171 109.8352 66.3666
A/J m 1.3091 10.9171 23.0434 0.0
BALB/cByJ m 20.2818 10.9171 42.0161 0.0
C3H/HeJ m 47.5167 12.0693 71.5448 23.4885
C57BL/6J m 69.8427 10.9171 91.577 48.1084
DBA/2J m 21.6636 10.9171 43.3979 0.0
FVB/NJ m 27.7209 10.9171 49.4552 5.9866
SJL/J m 30.3727 10.9171 52.107 8.6384




  GWAS USING LINEAR MIXED MODELS

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