Project measure / variable:   Schalkwyk1   pct_explore_OFTobj

ID, description, units MPD:34508   pct_explore_OFTobj   frequency exploring novel object, 5 min test   [%]  
Data set, strains Schalkwyk1   inbred   8 strains     sex: m     age: 9-11wks
Procedure open field test
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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.18   %
Median of the strain means2.58   %
SD of the strain means± 3.06
Coefficient of variation (CV)0.961
Min–max range of strain means0   –   8.00   %
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 715.3437 102.192 8.1263 < 0.0001
Residuals 78 980.8889 12.5755


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 5.73 7.85   11 2.37 1.37 0.83
A/J m 0.0 0.0   11 0.0 0.0 -1.04
BALB/cByJ m 0.273 0.905   11 0.273 3.32 -0.95
C3H/HeJ m 1.89 1.54   9 0.512 0.813 -0.42
C57BL/6J m 5.91 3.45   11 1.04 0.584 3.0, 15.0 0.89
DBA/2J m 8.0 3.26   11 0.982 0.407 3.0, 13.0 1.58
FVB/NJ m 3.27 3.23   11 0.973 0.986 0.03
SJL/J m 0.364 0.924   11 0.279 2.54 -0.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 5.7273 1.0692 7.8559 3.5986
A/J m 0.0 1.0692 2.1286 -2.1286
BALB/cByJ m 0.2727 1.0692 2.4014 -1.8559
C3H/HeJ m 1.8889 1.1821 4.2422 -0.4644
C57BL/6J m 5.9091 1.0692 8.0377 3.7804
DBA/2J m 8.0 1.0692 10.1286 5.8714
FVB/NJ m 3.2727 1.0692 5.4014 1.1441
SJL/J m 0.3636 1.0692 2.4923 -1.765




  GWAS USING LINEAR MIXED MODELS

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