Project measure / variable:   Berndt1   airway_res

ID, description, units MPD:34201   airway_res   airway resistance (naive, untreated, H2O pressure)   [cm/mL/s]  
Data set, strains Berndt1   inbred   37 strains     sex: both     age: 9-12wks
Procedure ventilator
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  STRAIN COMPARISON PLOT
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Berndt1 - airway resistance (naive, untreated, H2O pressure)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested36 strains33 strains
Mean of the strain means0.409   cm/mL/s 0.408   cm/mL/s
Median of the strain means0.424   cm/mL/s 0.406   cm/mL/s
SD of the strain means± 0.0814 ± 0.0783
Coefficient of variation (CV)0.199 0.192
Min–max range of strain means0.266   –   0.566   cm/mL/s 0.227   –   0.542   cm/mL/s
Mean sample size per strain8.6   mice 9.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0017 0.0017 0.2798 0.5971
strain 31 3.212 0.1036 17.4152 < 0.0001
sex:strain 31 0.5027 0.0162 2.7258 < 0.0001
Residuals 509 3.0284 0.0059


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.266 0.0336   9 0.0112 0.126 0.22, 0.31 -1.75
129S1/SvImJ m 0.32 0.0776   8 0.0275 0.243 0.21, 0.45 -1.12
A/J f 0.464 0.0959   10 0.0303 0.207 0.36, 0.61 0.68
A/J m 0.513 0.0939   9 0.0313 0.183 0.37, 0.65 1.35
AKR/J f 0.472 0.0707   9 0.0236 0.15 0.35, 0.59 0.78
AKR/J m 0.542 0.0725   8 0.0256 0.134 0.41, 0.62 1.72
BALB/cByJ f 0.441 0.0559   8 0.0198 0.127 0.38, 0.55 0.4
BALB/cByJ m 0.469 0.07   8 0.0247 0.149 0.33, 0.56 0.78
BALB/cJ f 0.496 0.0661   8 0.0234 0.133 0.4, 0.58 1.07
BALB/cJ m 0.484 0.0652   10 0.0206 0.135 0.38, 0.59 0.98
BPN/3J f 0.325 0.0711   8 0.0251 0.219 0.23, 0.46 -1.03
BTBR T+ Itpr3tf/J f 0.405 0.0935   10 0.0296 0.231 0.29, 0.6 -0.05
BTBR T+ Itpr3tf/J m 0.374 0.0384   10 0.0121 0.103 0.3, 0.42 -0.43
BUB/BnJ f 0.566 0.0806   9 0.0269 0.143 0.44, 0.68 1.93
BUB/BnJ m 0.454 0.0729   10 0.0231 0.161 0.34, 0.57 0.59
C3H/HeJ f 0.517 0.12   10 0.0381 0.233 0.39, 0.79 1.33
C3H/HeJ m 0.472 0.0959   9 0.032 0.203 0.28, 0.57 0.82
C57BL/10J f 0.297 0.0316   9 0.0105 0.107 0.24, 0.34 -1.37
C57BL/10J m 0.329 0.047   10 0.0149 0.143 0.26, 0.42 -1.01
C57BL/6J f 0.336 0.0504   8 0.0178 0.15 0.28, 0.4 -0.89
C57BL/6J m 0.458 0.125   8 0.0443 0.274 0.3, 0.64 0.64
C57BLKS/J f 0.272 0.0529   9 0.0176 0.194 0.21, 0.39 -1.68
C57BLKS/J m 0.324 0.0573   12 0.0165 0.177 0.23, 0.41 -1.07
C57BR/cdJ f 0.343 0.0582   7 0.022 0.17 0.29, 0.45 -0.81
C57BR/cdJ m 0.333 0.0422   10 0.0133 0.127 0.26, 0.4 -0.95
C57L/J f 0.39 0.129   6 0.0528 0.332 0.22, 0.56 -0.23
C57L/J m 0.329 0.026   10 0.00823 0.0791 0.29, 0.37 -1.01
CBA/J f 0.46 0.0947   8 0.0335 0.206 0.33, 0.62 0.63
CBA/J m 0.438 0.0612   10 0.0194 0.14 0.37, 0.57 0.39
CE/J f 0.421 0.0657   9 0.0219 0.156 0.3, 0.52 0.15
CE/J m 0.452 0.0604   9 0.0201 0.133 0.35, 0.53 0.57
DBA/1J f 0.459 0.0927   9 0.0309 0.202 0.3, 0.56 0.62
DBA/1J m 0.406 0.0965   10 0.0305 0.238 0.28, 0.59 -0.02
DBA/2J f 0.361 0.0436   10 0.0138 0.121 0.3, 0.44 -0.59
DBA/2J m 0.487 0.0645   10 0.0204 0.132 0.41, 0.56 1.01
FVB/NJ f 0.464 0.103   10 0.0327 0.223 0.28, 0.61 0.68
FVB/NJ m 0.385 0.0999   10 0.0316 0.26 0.26, 0.56 -0.29
I/LnJ f 0.491 0.0884   9 0.0295 0.18 0.34, 0.62 1.01
I/LnJ m 0.509 0.0928   8 0.0328 0.182 0.29, 0.59 1.29
KK/HlJ f 0.384 0.075   9 0.025 0.195 0.28, 0.52 -0.3
KK/HlJ m 0.335 0.0366   10 0.0116 0.109 0.28, 0.37 -0.93
LG/J f 0.283 0.0462   10 0.0146 0.163 0.22, 0.37 -1.54
LG/J m 0.275 0.031   10 0.0098 0.113 0.24, 0.34 -1.7
LP/J f 0.284 0.0357   9 0.0119 0.126 0.22, 0.33 -1.53
LP/J m 0.312 0.0382   10 0.0121 0.123 0.26, 0.38 -1.22
MA/MyJ f 0.401 0.0162   9 0.00539 0.0403 0.38, 0.43 -0.09
MRL/MpJ f 0.432 0.105   9 0.035 0.243 0.29, 0.66 0.29
MRL/MpJ m 0.39 0.12   9 0.0399 0.307 0.3, 0.68 -0.23
NOD/ShiLtJ f 0.368 0.0716   9 0.0239 0.195 0.26, 0.48 -0.5
NOD/ShiLtJ m 0.424 0.0529   9 0.0176 0.125 0.34, 0.49 0.21
NON/ShiLtJ f 0.544 0.111   7 0.0421 0.205 0.45, 0.77 1.66
NON/ShiLtJ m 0.433 0.0824   7 0.0311 0.19 0.34, 0.54 0.32
NZB/BlNJ m 0.358 0.0529   10 0.0167 0.148 0.28, 0.45 -0.64
NZO/HlLtJ f 0.427 0.124   9 0.0415 0.292 0.32, 0.74 0.22
NZW/LacJ f 0.323 0.0403   8 0.0142 0.125 0.26, 0.38 -1.05
NZW/LacJ m 0.227 0.0422   10 0.0133 0.186 0.18, 0.3 -2.31
P/J f 0.513 0.156   7 0.059 0.305 0.37, 0.82 1.28
P/J m 0.51 0.112   8 0.0396 0.22 0.33, 0.7 1.31
PL/J f 0.458 0.0756   9 0.0252 0.165 0.34, 0.55 0.61
PL/J m 0.494 0.111   8 0.0393 0.225 0.34, 0.67 1.1
PWD/PhJ f 0.47 0.0748   6 0.0306 0.159 0.38, 0.56 0.75
RIIIS/J f 0.462 0.128   6 0.0524 0.278 0.3, 0.67 0.66
RIIIS/J m 0.401 0.0752   9 0.0251 0.188 0.22, 0.47 -0.09
SJL/J f 0.361 0.05   8 0.0177 0.138 0.31, 0.47 -0.59
SJL/J m 0.381 0.0586   9 0.0195 0.154 0.32, 0.5 -0.34
SM/J f 0.447 0.0548   10 0.0173 0.123 0.35, 0.52 0.47
SM/J m 0.479 0.0869   8 0.0307 0.182 0.37, 0.58 0.91
SWR/J f 0.31 0.0439   9 0.0146 0.142 0.27, 0.39 -1.21
SWR/J m 0.357 0.081   10 0.0256 0.227 0.27, 0.52 -0.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.2656 0.0257 0.3161 0.215
129S1/SvImJ m 0.32 0.0273 0.3736 0.2664
A/J f 0.464 0.0244 0.5119 0.4161
A/J m 0.5133 0.0257 0.5638 0.4628
AKR/J f 0.4722 0.0257 0.5227 0.4217
AKR/J m 0.5425 0.0273 0.5961 0.4889
BALB/cByJ f 0.4413 0.0273 0.4948 0.3877
BALB/cByJ m 0.4687 0.0273 0.5223 0.4152
BALB/cJ f 0.4962 0.0273 0.5498 0.4427
BALB/cJ m 0.484 0.0244 0.5319 0.4361
BTBR T+ Itpr3tf/J f 0.405 0.0244 0.4529 0.3571
BTBR T+ Itpr3tf/J m 0.374 0.0244 0.4219 0.3261
BUB/BnJ f 0.5656 0.0257 0.6161 0.515
BUB/BnJ m 0.454 0.0244 0.5019 0.4061
C3H/HeJ f 0.517 0.0244 0.5649 0.4691
C3H/HeJ m 0.4722 0.0257 0.5227 0.4217
C57BL/10J f 0.2967 0.0257 0.3472 0.2462
C57BL/10J m 0.329 0.0244 0.3769 0.2811
C57BL/6J f 0.3362 0.0273 0.3898 0.2827
C57BL/6J m 0.4575 0.0273 0.5111 0.4039
C57BLKS/J f 0.2722 0.0257 0.3227 0.2217
C57BLKS/J m 0.3242 0.0223 0.3679 0.2804
C57BR/cdJ f 0.3429 0.0292 0.4001 0.2856
C57BR/cdJ m 0.333 0.0244 0.3809 0.2851
C57L/J f 0.39 0.0315 0.4519 0.3281
C57L/J m 0.329 0.0244 0.3769 0.2811
CBA/J f 0.46 0.0273 0.5136 0.4064
CBA/J m 0.438 0.0244 0.4859 0.3901
CE/J f 0.4211 0.0257 0.4716 0.3706
CE/J m 0.4522 0.0257 0.5027 0.4017
DBA/1J f 0.4589 0.0257 0.5094 0.4084
DBA/1J m 0.406 0.0244 0.4539 0.3581
DBA/2J f 0.361 0.0244 0.4089 0.3131
DBA/2J m 0.487 0.0244 0.5349 0.4391
FVB/NJ f 0.464 0.0244 0.5119 0.4161
FVB/NJ m 0.385 0.0244 0.4329 0.3371
I/LnJ f 0.4911 0.0257 0.5416 0.4406
I/LnJ m 0.5088 0.0273 0.5623 0.4552
KK/HlJ f 0.3844 0.0257 0.435 0.3339
KK/HlJ m 0.335 0.0244 0.3829 0.2871
LG/J f 0.283 0.0244 0.3309 0.2351
LG/J m 0.275 0.0244 0.3229 0.2271
LP/J f 0.2844 0.0257 0.335 0.2339
LP/J m 0.312 0.0244 0.3599 0.2641
MRL/MpJ f 0.4322 0.0257 0.4827 0.3817
MRL/MpJ m 0.39 0.0257 0.4405 0.3395
NOD/ShiLtJ f 0.3678 0.0257 0.4183 0.3173
NOD/ShiLtJ m 0.4244 0.0257 0.475 0.3739
NON/ShiLtJ f 0.5443 0.0292 0.6016 0.487
NON/ShiLtJ m 0.4329 0.0292 0.4901 0.3756
NZW/LacJ f 0.3225 0.0273 0.3761 0.2689
NZW/LacJ m 0.227 0.0244 0.2749 0.1791
P/J f 0.5129 0.0292 0.5701 0.4556
P/J m 0.51 0.0273 0.5636 0.4564
PL/J f 0.4578 0.0257 0.5083 0.4073
PL/J m 0.4938 0.0273 0.5473 0.4402
RIIIS/J f 0.4617 0.0315 0.5235 0.3998
RIIIS/J m 0.4011 0.0257 0.4516 0.3506
SJL/J f 0.3612 0.0273 0.4148 0.3077
SJL/J m 0.3811 0.0257 0.4316 0.3306
SM/J f 0.447 0.0244 0.4949 0.3991
SM/J m 0.4787 0.0273 0.5323 0.4252
SWR/J f 0.31 0.0257 0.3605 0.2595
SWR/J m 0.357 0.0244 0.4049 0.3091


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.2928 0.0187 0.3296 0.256
A/J both 0.4887 0.0177 0.5235 0.4539
AKR/J both 0.5074 0.0187 0.5442 0.4705
BALB/cByJ both 0.455 0.0193 0.4929 0.4171
BALB/cJ both 0.4901 0.0183 0.5261 0.4542
BTBR T+ Itpr3tf/J both 0.3895 0.0172 0.4234 0.3556
BUB/BnJ both 0.5098 0.0177 0.5446 0.475
C3H/HeJ both 0.4946 0.0177 0.5294 0.4598
C57BL/10J both 0.3128 0.0177 0.3476 0.278
C57BL/6J both 0.3969 0.0193 0.4348 0.359
C57BLKS/J both 0.2982 0.017 0.3316 0.2648
C57BR/cdJ both 0.3379 0.019 0.3753 0.3006
C57L/J both 0.3595 0.0199 0.3986 0.3204
CBA/J both 0.449 0.0183 0.4849 0.4131
CE/J both 0.4367 0.0182 0.4724 0.4009
DBA/1J both 0.4324 0.0177 0.4673 0.3976
DBA/2J both 0.424 0.0172 0.4579 0.3901
FVB/NJ both 0.4245 0.0172 0.4584 0.3906
I/LnJ both 0.4999 0.0187 0.5367 0.4631
KK/HlJ both 0.3597 0.0177 0.3945 0.3249
LG/J both 0.279 0.0172 0.3129 0.2451
LP/J both 0.2982 0.0177 0.333 0.2634
MRL/MpJ both 0.4111 0.0182 0.4468 0.3754
NOD/ShiLtJ both 0.3961 0.0182 0.4318 0.3604
NON/ShiLtJ both 0.4886 0.0206 0.5291 0.4481
NZW/LacJ both 0.2747 0.0183 0.3107 0.2388
P/J both 0.5114 0.02 0.5506 0.4722
PL/J both 0.4758 0.0187 0.5126 0.4389
RIIIS/J both 0.4314 0.0203 0.4713 0.3915
SJL/J both 0.3712 0.0187 0.408 0.3344
SM/J both 0.4629 0.0183 0.4988 0.4269
SWR/J both 0.3335 0.0177 0.3683 0.2987




  GWAS USING LINEAR MIXED MODELS