Project measure / variable:   Jax5   wean_born_ratio

ID, description, units MPD:31406   wean_born_ratio   wean to born ratio per litter   [ratio]  
Data set, strains Jax5   inbred   35 strains     sex: f     age: 6-40wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Jax5 - wean to born ratio per litter



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested35 strains
Mean of the strain means0.895   ratio
Median of the strain means0.915   ratio
SD of the strain means± 0.0769
Coefficient of variation (CV)0.0860
Min–max range of strain means0.594   –   0.982   ratio
Mean sample size per strain185.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 30.9917 0.9115 14.4432 < 0.0001
Residuals 6416 404.9185 0.0631


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J f 0.858 0.332   150 0.0271 0.387 -0.48
129S1/SvImJ f 0.901 0.256   213 0.0175 0.284 0.08
129X1/SvJ f 0.889 0.275   213 0.0189 0.31 -0.08
A/J f 0.881 0.292   210 0.0201 0.331 -0.18
AKR/J f 0.968 0.144   164 0.0112 0.148 0.95
B6.129P2-Apoetm1Unc/J f 0.829 0.293   191 0.0212 0.354 -0.86
B6(Cg)-Tyrc-2J/J f 0.926 0.207   59 0.027 0.224 0.4
BALB/cByJ f 0.956 0.178   143 0.0149 0.186 0.79
BALB/cJ f 0.982 0.0877   198 0.00623 0.0893 1.13
C3HeB/FeJ f 0.961 0.163   180 0.0122 0.17 0.86
C3H/HeJ f 0.918 0.238   174 0.018 0.259 0.3
C3H/HeOuJ f 0.929 0.224   211 0.0154 0.241 0.44
C57BL/10J f 0.906 0.236   190 0.0171 0.261 0.14
C57BL/6J f 0.924 0.228   260 0.0141 0.247 0.38
C57BLKS/J f 0.853 0.298   119 0.0273 0.349 -0.55
C57L/J f 0.927 0.209   128 0.0185 0.226 0.42
CAST/EiJ f 0.818 0.335   177 0.0252 0.41 -1.0
CBA/CaJ f 0.958 0.124   202 0.00875 0.13 0.82
CBA/J f 0.905 0.255   265 0.0156 0.281 0.13
DBA/1J f 0.908 0.25   255 0.0157 0.275 0.17
DBA/1LacJ f 0.845 0.292   254 0.0183 0.346 -0.65
DBA/2J f 0.943 0.195   261 0.0121 0.207 0.62
FVB/NJ f 0.979 0.0843   240 0.00544 0.0862 1.09
KK/HlJ f 0.845 0.298   78 0.0337 0.352 -0.65
LP/J f 0.768 0.372   187 0.0272 0.485 -1.65
MRL/MpJ f 0.951 0.169   168 0.013 0.178 0.73
NOD.CB17-Prkdcscid/J f 0.937 0.206   203 0.0144 0.22 0.55
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 0.963 0.13   95 0.0133 0.135 0.88
NOD/ShiLtJ f 0.921 0.22   175 0.0166 0.239 0.34
NZB/BlNJ f 0.594 0.468   127 0.0415 0.787 -3.91
NZW/LacJ f 0.798 0.329   194 0.0236 0.412 -1.26
PL/J f 0.894 0.281   215 0.0192 0.315 -0.01
SJL/J f 0.915 0.257   251 0.0162 0.281 0.26
SM/J f 0.797 0.369   136 0.0316 0.462 -1.27
SWR/J f 0.979 0.117   165 0.00909 0.119 1.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J f 0.8579 0.0205 0.8981 0.8177
129S1/SvImJ f 0.9008 0.0172 0.9345 0.867
129X1/SvJ f 0.8892 0.0172 0.9229 0.8555
A/J f 0.881 0.0173 0.9149 0.847
AKR/J f 0.9676 0.0196 1.006 0.9291
B6.129P2-Apoetm1Unc/J f 0.8291 0.0182 0.8647 0.7934
B6(Cg)-Tyrc-2J/J f 0.9256 0.0327 0.9897 0.8615
BALB/cByJ f 0.9563 0.021 0.9975 0.9151
BALB/cJ f 0.9822 0.0179 1.0172 0.9472
C3HeB/FeJ f 0.9612 0.0187 0.9979 0.9245
C3H/HeJ f 0.9184 0.019 0.9558 0.8811
C3H/HeOuJ f 0.9292 0.0173 0.9631 0.8953
C57BL/10J f 0.9058 0.0182 0.9415 0.8701
C57BL/6J f 0.9238 0.0156 0.9543 0.8933
C57BLKS/J f 0.8529 0.023 0.8981 0.8078
C57L/J f 0.9267 0.0222 0.9702 0.8832
CAST/EiJ f 0.8184 0.0189 0.8554 0.7813
CBA/CaJ f 0.9582 0.0177 0.9929 0.9236
CBA/J f 0.9051 0.0154 0.9353 0.8748
DBA/1J f 0.908 0.0157 0.9388 0.8772
DBA/1LacJ f 0.8446 0.0158 0.8755 0.8137
DBA/2J f 0.9426 0.0156 0.9731 0.9122
FVB/NJ f 0.9787 0.0162 1.0105 0.9469
KK/HlJ f 0.8447 0.0284 0.9005 0.789
LP/J f 0.7683 0.0184 0.8044 0.7323
MRL/MpJ f 0.9511 0.0194 0.9891 0.9131
NOD.CB17-Prkdcscid/J f 0.9368 0.0176 0.9714 0.9023
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 0.9631 0.0258 1.0136 0.9125
NOD/ShiLtJ f 0.9205 0.019 0.9577 0.8833
NZB/BlNJ f 0.5945 0.0223 0.6382 0.5508
NZW/LacJ f 0.7976 0.018 0.8329 0.7622
PL/J f 0.8941 0.0171 0.9277 0.8605
SJL/J f 0.9149 0.0159 0.946 0.8838
SM/J f 0.7975 0.0215 0.8397 0.7553
SWR/J f 0.9786 0.0196 1.0169 0.9403




  GWAS USING LINEAR MIXED MODELS