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Project measure / variable:   Jaxpheno4   CHr8

ID, description, units MPD:22977   CHr8   reticulocyte corpuscular hemoglobin (CHr)   [pg]  at age age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - reticulocyte corpuscular hemoglobin (CHr) at age age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means16.6   pg 16.2   pg
Median of the strain means16.6   pg 16.3   pg
SD of the strain means± 0.943 ± 0.747
Coefficient of variation (CV)0.0568 0.0460
Min–max range of strain means14.8   –   17.8   pg 14.8   –   17.6   pg
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.6859 5.6859 31.9007 < 0.0001
strain 10 273.9234 27.3923 153.6846 < 0.0001
sex:strain 10 18.2405 1.824 10.2338 < 0.0001
Residuals 386 68.7996 0.1782


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 16.6 0.143   10 0.0453 0.00861 16.4, 16.9 -0.02
B6.129P2-Apoetm1Unc/J m 16.3 0.3   10 0.0948 0.0184 15.7, 16.8 0.11
B6D2F1/J f 15.4 0.222   10 0.0702 0.0145 14.9, 15.6 -1.29
B6D2F1/J m 15.3 0.219   12 0.0633 0.0143 15.0, 15.7 -1.23
BALB/cByJ f 16.6 0.448   21 0.0977 0.0269 15.3, 17.4 -0.02
BALB/cByJ m 16.4 0.254   20 0.0568 0.0155 15.8, 16.9 0.24
BALB/cJ f 17.0 0.392   22 0.0836 0.0231 16.2, 17.7 0.4
BALB/cJ m 16.7 0.231   21 0.0505 0.0138 16.4, 17.2 0.65
C3H/HeJ f 17.3 0.255   13 0.0709 0.0147 16.8, 17.7 0.72
C3H/HeJ m 16.5 0.218   11 0.0658 0.0132 16.0, 16.8 0.38
C57BL/6J f 15.8 0.389   42 0.06 0.0246 15.1, 16.7 -0.87
C57BL/6J m 15.8 0.434   34 0.0744 0.0275 15.2, 16.6 -0.56
CBA/J f 16.6 0.426   21 0.093 0.0257 15.8, 17.5 -0.02
CBA/J m 16.7 0.548   23 0.114 0.0328 15.8, 17.8 0.65
DBA/2J f 14.8 0.327   23 0.0681 0.0221 14.2, 15.4 -1.93
DBA/2J m 14.8 0.166   20 0.0371 0.0112 14.5, 15.1 -1.9
FVB/NJ f 17.3 0.199   11 0.06 0.0115 17.1, 17.6 0.72
FVB/NJ m 16.0 0.486   14 0.13 0.0305 15.5, 16.7 -0.29
NOD.CB17-Prkdcscid/J f 17.6 0.352   11 0.106 0.02 17.0, 18.4 1.04
NOD.CB17-Prkdcscid/J m 16.3 0.509   12 0.147 0.0312 15.9, 17.3 0.11
NOD/ShiLtJ f 17.8 0.805   21 0.176 0.0451 16.7, 18.8 1.25
NOD/ShiLtJ m 17.6 0.633   26 0.124 0.036 16.6, 18.3 1.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 16.65 0.1335 16.9125 16.3875
B6.129P2-Apoetm1Unc/J m 16.29 0.1335 16.5525 16.0275
B6D2F1/J f 15.36 0.1335 15.6225 15.0975
B6D2F1/J m 15.3417 0.1219 15.5813 15.102
BALB/cByJ f 16.6429 0.0921 16.824 16.4617
BALB/cByJ m 16.365 0.0944 16.5506 16.1794
BALB/cJ f 17.0045 0.09 17.1815 16.8276
BALB/cJ m 16.7429 0.0921 16.924 16.5617
C3H/HeJ f 17.3231 0.1171 17.5533 17.0929
C3H/HeJ m 16.5182 0.1273 16.7685 16.2679
C57BL/6J f 15.7976 0.0651 15.9257 15.6695
C57BL/6J m 15.7676 0.0724 15.91 15.6253
CBA/J f 16.581 0.0921 16.7621 16.3998
CBA/J m 16.6783 0.088 16.8513 16.5052
DBA/2J f 14.7957 0.088 14.9687 14.6226
DBA/2J m 14.77 0.0944 14.9556 14.5844
FVB/NJ f 17.2818 0.1273 17.5321 17.0315
FVB/NJ m 15.9643 0.1128 16.1861 15.7424
NOD.CB17-Prkdcscid/J f 17.6273 0.1273 17.8775 17.377
NOD.CB17-Prkdcscid/J m 16.3083 0.1219 16.548 16.0687
NOD/ShiLtJ f 17.8381 0.0921 18.0192 17.657
NOD/ShiLtJ m 17.5654 0.0828 17.7282 17.4026


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 16.47 0.0944 16.6556 16.2844
B6D2F1/J both 15.3508 0.0904 15.5285 15.1731
BALB/cByJ both 16.5039 0.066 16.6336 16.3743
BALB/cJ both 16.8737 0.0644 17.0003 16.7471
C3H/HeJ both 16.9206 0.0865 17.0907 16.7506
C57BL/6J both 15.7826 0.0487 15.8784 15.6869
CBA/J both 16.6296 0.0637 16.7549 16.5043
DBA/2J both 14.7828 0.0645 14.9097 14.6559
FVB/NJ both 16.6231 0.0851 16.7903 16.4558
NOD.CB17-Prkdcscid/J both 16.9678 0.0881 17.141 16.7946
NOD/ShiLtJ both 17.7017 0.0619 17.8235 17.58




  GWAS USING LINEAR MIXED MODELS