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Project measure / variable:   Jaxpheno3   TP8

ID, description, units MPD:22812   TP8   total protein (plasma TP)   [g/dL]  at age 8wks  
Data set, strains Jaxpheno3   inbred   11 strains     sex: both     age: 8wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Jaxpheno3 - total protein (plasma TP) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means5.95   g/dL 6.04   g/dL
Median of the strain means5.85   g/dL 6.04   g/dL
SD of the strain means± 0.354 ± 0.331
Coefficient of variation (CV)0.0596 0.0548
Min–max range of strain means5.42   –   6.45   g/dL 5.38   –   6.51   g/dL
Mean sample size per strain15.8   mice 17.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2374 0.2374 1.9943 0.1587
strain 10 30.2071 3.0207 25.3762 < 0.0001
sex:strain 10 3.859 0.3859 3.2419 0.0005
Residuals 378 44.9959 0.119


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 5.5 0.176   10 0.0558 0.0321 5.1, 5.8 -1.26
B6.129P2-Apoetm1Unc/J m 5.77 0.125   10 0.0396 0.0217 5.5, 5.9 -0.8
B6D2F1/J f 6.45 0.363   10 0.115 0.0563 6.0, 7.0 1.42
B6D2F1/J m 6.51 0.218   10 0.069 0.0335 6.2, 6.9 1.44
BALB/cByJ f 5.81 0.317   20 0.0708 0.0545 5.2, 6.4 -0.39
BALB/cByJ m 5.84 0.267   20 0.0596 0.0456 5.4, 6.4 -0.59
BALB/cJ f 5.7 0.299   20 0.0669 0.0525 5.3, 6.3 -0.7
BALB/cJ m 5.38 0.224   22 0.0477 0.0416 5.1, 6.0 -1.98
C3H/HeJ f 6.4 0.163   10 0.0516 0.0255 6.2, 6.8 1.28
C3H/HeJ m 6.4 0.267   10 0.0843 0.0417 6.1, 6.8 1.1
C57BL/6J f 6.09 0.439   30 0.0801 0.072 5.4, 6.7 0.4
C57BL/6J m 6.04 0.552   54 0.0751 0.0914 4.7, 7.1 0.01
CBA/J f 6.01 0.279   21 0.0609 0.0464 5.5, 6.6 0.18
CBA/J m 6.24 0.3   30 0.0548 0.0481 5.7, 6.9 0.62
DBA/2J f 5.81 0.324   21 0.0707 0.0558 5.2, 6.6 -0.39
DBA/2J m 5.84 0.248   20 0.0554 0.0425 5.5, 6.4 -0.59
FVB/NJ f 5.42 0.199   10 0.0629 0.0367 5.2, 5.7 -1.49
FVB/NJ m 5.88 0.286   12 0.0827 0.0488 5.5, 6.5 -0.47
NOD.CB17-Prkdcscid/J f 5.85 0.36   10 0.114 0.0615 5.3, 6.6 -0.27
NOD.CB17-Prkdcscid/J m 6.2 0.262   10 0.083 0.0423 5.9, 6.6 0.5
NOD/ShiLtJ f 6.38 0.246   20 0.0551 0.0386 6.0, 6.8 1.22
NOD/ShiLtJ m 6.29 0.38   20 0.0849 0.0604 5.6, 6.9 0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 5.5 0.1091 5.7145 5.2855
B6.129P2-Apoetm1Unc/J m 5.77 0.1091 5.9845 5.5555
B6D2F1/J f 6.45 0.1091 6.6645 6.2355
B6D2F1/J m 6.51 0.1091 6.7245 6.2955
BALB/cByJ f 5.815 0.0771 5.9667 5.6633
BALB/cByJ m 5.845 0.0771 5.9967 5.6933
BALB/cJ f 5.7 0.0771 5.8517 5.5483
BALB/cJ m 5.3818 0.0736 5.5265 5.2372
C3H/HeJ f 6.4 0.1091 6.6145 6.1855
C3H/HeJ m 6.4 0.1091 6.6145 6.1855
C57BL/6J f 6.0933 0.063 6.2172 5.9695
C57BL/6J m 6.0352 0.047 6.1275 5.9429
CBA/J f 6.0095 0.0753 6.1576 5.8615
CBA/J m 6.2433 0.063 6.3672 6.1195
DBA/2J f 5.8095 0.0753 5.9576 5.6615
DBA/2J m 5.84 0.0771 5.9917 5.6883
FVB/NJ f 5.42 0.1091 5.6345 5.2055
FVB/NJ m 5.875 0.0996 6.0708 5.6792
NOD.CB17-Prkdcscid/J f 5.85 0.1091 6.0645 5.6355
NOD.CB17-Prkdcscid/J m 6.2 0.1091 6.4145 5.9855
NOD/ShiLtJ f 6.38 0.0771 6.5317 6.2283
NOD/ShiLtJ m 6.29 0.0771 6.4417 6.1383


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 5.635 0.0771 5.7867 5.4833
B6D2F1/J both 6.48 0.0771 6.6317 6.3283
BALB/cByJ both 5.83 0.0546 5.9373 5.7227
BALB/cJ both 5.5409 0.0533 5.6457 5.4361
C3H/HeJ both 6.4 0.0771 6.5517 6.2483
C57BL/6J both 6.0643 0.0393 6.1415 5.987
CBA/J both 6.1264 0.0491 6.2229 6.0299
DBA/2J both 5.8248 0.0539 5.9307 5.7188
FVB/NJ both 5.6475 0.0739 5.7927 5.5023
NOD.CB17-Prkdcscid/J both 6.025 0.0771 6.1767 5.8733
NOD/ShiLtJ both 6.335 0.0546 6.4423 6.2277




  GWAS USING LINEAR MIXED MODELS