Project measure / variable:   Richfield1   amb_aver

ID, description, units MPD:14514   amb_aver   ambulatory activity counts, 45 min test   [n]  daily avg  
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Richfield1 - ambulatory activity counts, 45 min test daily avg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means3708   n
Median of the strain means2964   n
SD of the strain means± 2240
Coefficient of variation (CV)0.604
Min–max range of strain means1110   –   8549   n
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 913826358.7555 65273311.3397 39.0716 < 0.0001
Residuals 144 240567281.6722 1670606.1227


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 1110.0 590.0   10 187.0 0.532 336.0, 1979.0 -1.16
A/HeJ m 2547.0 885.0   10 280.0 0.347 1355.0, 3998.0 -0.52
A/J m 1528.0 679.0   10 215.0 0.445 830.0, 3013.0 -0.97
AKR/J m 5231.0 1403.0   10 444.0 0.268 2359.0, 7270.0 0.68
B10.D2-Hc0 m 7404.0 1162.0   10 368.0 0.157 5772.0, 9235.0 1.65
BALB/cByJ m 4938.0 2556.0   10 808.0 0.518 2637.0, 11111.0 0.55
BALB/cJ m 2622.0 1332.0   10 421.0 0.508 687.0, 4546.0 -0.49
C3H/HeJ m 2964.0 688.0   10 218.0 0.232 1493.0, 3614.0 -0.33
C57BL/6J m 8549.0 1812.0   20 405.0 0.212 5611.0, 12906.0 2.16
CAST/EiJ m 5468.0 925.0   10 293.0 0.169 4021.0, 6490.0 0.79
DBA/2J m 2368.0 755.0   10 239.0 0.319 1242.0, 3779.0 -0.6
MRL/MpJ m 4245.0 1731.0   10 547.0 0.408 2297.0, 7572.0 0.24
NZB/BlNJ m 1946.0 796.0   10 252.0 0.409 753.0, 3302.0 -0.79
NZW/LacJ m 3526.0 788.0   10 249.0 0.223 2281.0, 4900.0 -0.08
SPRET/EiJ m 1180.0 694.0   9 231.0 0.588 607.0, 2880.0 -1.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 1110.4 408.7305 1918.2865 302.5135
A/HeJ m 2547.3 408.7305 3355.1865 1739.4135
A/J m 1527.7 408.7305 2335.5865 719.8135
AKR/J m 5230.9 408.7305 6038.7865 4423.0135
B10.D2-Hc0 m 7404.5 408.7305 8212.3865 6596.6135
BALB/cByJ m 4937.5 408.7305 5745.3865 4129.6135
BALB/cJ m 2621.7 408.7305 3429.5865 1813.8135
C3H/HeJ m 2964.1 408.7305 3771.9865 2156.2135
C57BL/6J m 8549.15 289.0161 9120.412 7977.888
CAST/EiJ m 5467.6 408.7305 6275.4865 4659.7135
DBA/2J m 2367.9 408.7305 3175.7865 1560.0135
MRL/MpJ m 4245.0 408.7305 5052.8865 3437.1135
NZB/BlNJ m 1946.0 408.7305 2753.8865 1138.1135
NZW/LacJ m 3525.7 408.7305 4333.5865 2717.8135
SPRET/EiJ m 1180.4444 430.8398 2032.0316 328.8573




  GWAS USING LINEAR MIXED MODELS