Project measure / variable:   Project1202   Ymaze.Prct.SponAlt_6_Ntg_HFD

ID, description, units MPD:130384   Ymaze.Prct.SponAlt_6_Ntg_HFD   Ymaze.Prct.SponAlt    6 Ntg HFD  
Data set, strains Project1202   F1 AD-BXD   33 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1202 - Ymaze.Prct.SponAlt 6 Ntg HFD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested33 strains31 strains
Mean of the strain means58.8   None 61.91   None
Median of the strain means59.2   None 61.38   None
SD of the strain means± 3.6408 ± 4.244
Coefficient of variation (CV)0.0619 0.0685
Min–max range of strain means49.286   –   66.6   None 54.33   –   76.0   None
Mean sample size per strain9.0   mice 8.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1371.8287 1371.8287 9.8068 0.0018
strain 30 3882.0457 129.4015 0.9251 0.5833
sex:strain 30 3910.8671 130.3622 0.9319 0.5726
Residuals 499 69802.8306 139.8854


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD113)F1 f 60.0 16.14   5 7.218 0.269 33.0, 74.0 0.33
(B6.5XFAD x BXD113)F1 m 67.2 18.377   5 8.2183 0.2735 50.0, 92.0 1.25
(B6.5XFAD x BXD124)F1 f 57.57 9.2213   14 2.4645 0.1602 36.0, 73.0 -0.34
(B6.5XFAD x BXD124)F1 m 56.36 16.47   11 4.9658 0.2922 20.0, 76.0 -1.31
(B6.5XFAD x BXD125)F1 f 59.8 14.237   5 6.3671 0.2381 43.0, 73.0 0.28
(B6.5XFAD x BXD125)F1 m 62.22 8.7289   9 2.9096 0.1403 51.0, 78.0 0.07
(B6.5XFAD x BXD12)F1 f 57.2 7.2847   10 2.3036 0.1274 40.0, 64.0 -0.44
(B6.5XFAD x BXD12)F1 m 61.8 13.122   5 5.8686 0.2123 50.0, 78.0 -0.03
(B6.5XFAD x BXD14)F1-ADtg f 62.67 19.572   6 7.9903 0.3123 31.0, 80.0 1.06
(B6.5XFAD x BXD14)F1-ADtg m 69.11 12.108   9 4.0361 0.1752 55.0, 94.0 1.7
(B6.5XFAD x BXD152)F1 f 61.3 17.525   10 5.5419 0.2859 43.0, 100.0 0.69
(B6.5XFAD x BXD152)F1 m 76.0 18.262   5 8.167 0.2403 50.0, 100.0 3.32
(B6.5XFAD x BXD154)F1 f 54.71 7.5214   7 2.8428 0.1375 44.0, 63.0 -1.12
(B6.5XFAD x BXD154)F1 m 59.89 9.6235   9 3.2078 0.1607 51.0, 77.0 -0.48
(B6.5XFAD x BXD161)F1 f 57.6 12.112   10 3.8303 0.2103 42.0, 77.0 -0.33
(B6.5XFAD x BXD161)F1 m 61.7 9.7872   10 3.095 0.1586 52.0, 77.0 -0.05
(B6.5XFAD x BXD169)F1 f 57.5 6.9282   8 2.4495 0.1205 49.0, 69.0 -0.36
(B6.5XFAD x BXD169)F1 m 60.1 8.346   10 2.6392 0.1389 42.0, 72.0 -0.43
(B6.5XFAD x BXD16)F1-ADtg f 53.0 10.472   13 2.9045 0.1976 41.0, 73.0 -1.59
(B6.5XFAD x BXD16)F1-ADtg m 61.38 13.298   8 4.7016 0.2167 48.0, 79.0 -0.13
(B6.5XFAD x BXD19)F1 f 59.5 12.186   10 3.8536 0.2048 33.0, 79.0 0.19
(B6.5XFAD x BXD19)F1 m 67.33 8.9368   6 3.6484 0.1327 53.0, 80.0 1.28
(B6.5XFAD x BXD28)F1 f 61.89 14.313   9 4.771 0.2313 38.0, 80.0 0.85
(B6.5XFAD x BXD28)F1 m 59.58 13.097   12 3.7808 0.2198 39.0, 82.0 -0.55
(B6.5XFAD x BXD38)F1 f 63.0 9.9197   6 4.0497 0.1575 46.0, 74.0 1.15
(B6.5XFAD x BXD38)F1 m 65.0 9.8184   11 2.9603 0.1511 54.0, 86.0 0.73
(B6.5XFAD x BXD39)F1 f 59.57 7.9552   7 3.0068 0.1335 45.0, 71.0 0.21
(B6.5XFAD x BXD39)F1 m 59.12 19.917   8 7.0418 0.3369 20.0, 83.0 -0.66
(B6.5XFAD x BXD50)F1 f 58.1 9.927   10 3.1392 0.1709 45.0, 72.0 -0.19
(B6.5XFAD x BXD50)F1 m 62.7 13.022   10 4.1178 0.2077 46.0, 83.0 0.19
(B6.5XFAD x BXD55)F1-ADtg f 59.2 9.0406   10 2.8589 0.1527 47.0, 76.0 0.11
(B6.5XFAD x BXD55)F1-ADtg m 59.1 10.354   10 3.2743 0.1752 41.0, 73.0 -0.66
(B6.5XFAD x BXD60)F1-ADtg f 57.54 10.967   13 3.0416 0.1906 32.0, 71.0 -0.35
(B6.5XFAD x BXD60)F1-ADtg m 56.75 16.568   8 5.8577 0.2919 33.0, 85.0 -1.22
(B6.5XFAD x BXD61)F1-ADtg f 49.286 22.839   14 6.1039 0.4634 -2.61
(B6.5XFAD x BXD61)F1-ADtg m 66.23 11.819   13 3.278 0.1785 43.0, 78.0 1.02
(B6.5XFAD x BXD62)F1-ADtg f 58.45 9.3527   11 2.8199 0.16 48.0, 78.0 -0.1
(B6.5XFAD x BXD62)F1-ADtg m 60.56 7.0907   9 2.3636 0.1171 47.0, 69.0 -0.32
(B6.5XFAD x BXD65)F1-ADtg f 63.92 8.0505   12 2.324 0.126 41.0, 71.0 1.41
(B6.5XFAD x BXD65)F1-ADtg m 60.45 11.518   11 3.4729 0.1905 42.0, 74.0 -0.34
(B6.5XFAD x BXD66)F1-ADtg f 56.44 11.381   9 3.7937 0.2016 34.0, 70.0 -0.65
(B6.5XFAD x BXD66)F1-ADtg m 62.2 9.3429   10 2.9545 0.1502 44.0, 78.0 0.07
(B6.5XFAD x BXD68)F1-ADtg f 63.0 8.9443   11 2.6968 0.142 50.0, 77.0 1.15
(B6.5XFAD x BXD68)F1-ADtg m 63.0 7.9791   7 3.0158 0.1267 53.0, 73.0 0.26
(B6.5XFAD x BXD73)F1 f 60.91 16.688   11 5.0316 0.274 27.0, 82.0 0.58
(B6.5XFAD x BXD74)F1 f 61.0 9.8387   6 4.0166 0.1613 48.0, 72.0 0.6
(B6.5XFAD x BXD74)F1 m 54.33 11.015   3 6.3596 0.2027 43.0, 65.0 -1.79
(B6.5XFAD x BXD75)F1-ADtg f 61.12 4.051   8 1.4322 0.0663 56.0, 68.0 0.64
(B6.5XFAD x BXD75)F1-ADtg m 59.45 15.082   11 4.5475 0.2537 42.0, 88.0 -0.58
(B6.5XFAD x BXD77)F1-ADtg f 55.82 8.7615   11 2.6417 0.157 44.0, 72.0 -0.82
(B6.5XFAD x BXD77)F1-ADtg m 59.64 11.656   11 3.5143 0.1954 44.0, 82.0 -0.54
(B6.5XFAD x BXD83)F1 f 54.17 7.0261   6 2.8684 0.1297 43.0, 63.0 -1.27
(B6.5XFAD x BXD83)F1 m 64.17 11.089   6 4.5271 0.1728 44.0, 75.0 0.53
(B6.5XFAD x BXD87)F1-ADtg f 60.29 8.2404   7 3.1146 0.1367 50.0, 71.0 0.41
(B6.5XFAD x BXD87)F1-ADtg m 60.93 8.6777   14 2.3192 0.1424 42.0, 74.0 -0.23
(B6.5XFAD x BXD89)F1-ADtg f 54.5 10.607   2   7.5 0.1946 47.0, 62.0 -1.18
(B6.5XFAD x BXD99)F1-ADtg f 55.38 6.567   8 2.3218 0.1186 45.0, 67.0 -0.94
(B6.5XFAD x BXD99)F1-ADtg m 63.5 19.698   8 6.9642 0.3102 33.0, 91.0 0.37
(B6.5XFAD x D2)F1-ADtg f 66.6 8.5271   10 2.6965 0.128 50.0, 84.0 2.14
(B6.5XFAD x D2)F1-ADtg m 57.5 13.892   4 6.9462 0.2416 48.0, 78.0 -1.04
(B6 x DBA/2J-Gpnmb+/SjJ)F1 f 63.7 5.2292   10 1.6536 0.0821 53.0, 71.0 1.35
(B6 x DBA/2J-Gpnmb+/SjJ)F1 m 63.62 9.4476   13 2.6203 0.1485 48.0, 80.0 0.4
C57BL/6J f 55.62 6.8648   8 2.4271 0.1234 42.0, 62.0 -0.87
C57BL/6J m 58.36 12.331   11 3.7179 0.2113 41.0, 85.0 -0.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 59.2 3.7401260962 66.5483356672 51.8516643328
129S1/SvImJ 2 59.1 3.7401260962 66.4483356672 51.7516643328
A/J 1 57.5384615385 3.2803075859 63.9833782639 51.093544813
A/J 2 56.75 4.1815880977 64.9656890366 48.5343109634
AKR/J 1 60.0 5.2893370502 70.3921159614 49.6078840386
AKR/J 2 67.2 5.2893370502 77.5921159614 56.8078840386
ALR/LtJ 1 61.3 3.7401260962 68.6483356672 53.9516643328
ALR/LtJ 2 76.0 5.2893370502 86.3921159614 65.6078840386
ALS/LtJ 1 54.7142857143 4.4703057127 63.4972267347 45.9313446939
ALS/LtJ 2 59.8888888889 3.9424390667 67.6347147954 52.1430629823
BALB/cJ 1 49.2857142857 3.1609834834 55.49619144 43.0752371314
BALB/cJ 2 66.2307692308 3.2803075859 72.6756859562 59.7858525053
BPH/2J 1 57.6 3.7401260962 64.9483356672 50.2516643328
BPH/2J 2 61.7 3.7401260962 69.0483356672 54.3516643328
BPL/1J 1 59.8 5.2893370502 70.1921159614 49.4078840386
BPL/1J 2 62.2222222222 3.9424390667 69.9680481288 54.4763963157
BPN/3J 1 63.0 4.8284820277 72.4866605537 53.5133394463
BPN/3J 2 65.0 3.5660703118 72.0063631519 57.9936368481
BTBR T+ Itpr3tf/J 1 62.6666666667 4.8284820277 72.1533272204 53.1800061129
BTBR T+ Itpr3tf/J 2 69.1111111111 3.9424390667 76.8569370177 61.3652852046
BUB/BnJ 1 57.5 4.1815880977 65.7156890366 49.2843109634
BUB/BnJ 2 60.1 3.7401260962 67.4483356672 52.7516643328
C3H/HeJ 1 58.4545454545 3.5660703118 65.4609086064 51.4481823027
C3H/HeJ 2 60.5555555556 3.9424390667 68.3013814621 52.809729649
C57BL/6J 1 63.9166666667 3.4142523846 70.624748675 57.2085846583
C57BL/6J 2 60.4545454545 3.5660703118 67.4609086064 53.4481823027
C58/J 1 59.5714285714 4.4703057127 68.3543695918 50.788487551
C58/J 2 59.125 4.1815880977 67.3406890366 50.9093109634
CAST/EiJ 1 53.0 3.2803075859 59.4449167254 46.5550832746
CAST/EiJ 2 61.375 4.1815880977 69.5906890366 53.1593109634
CBA/J 1 57.2 3.7401260962 64.5483356672 49.8516643328
CBA/J 2 61.8 5.2893370502 72.1921159614 51.4078840386
CE/J 1 59.5 3.7401260962 66.8483356672 52.1516643328
CE/J 2 67.3333333333 4.8284820277 76.8199938871 57.8466727796
DBA/2J 1 56.4444444444 3.9424390667 64.190270351 48.6986185379
DBA/2J 2 62.2 3.7401260962 69.5483356672 54.8516643328
FVB/NJ 1 63.0 3.5660703118 70.0063631519 55.9936368481
FVB/NJ 2 63.0 4.4703057127 71.7829410204 54.2170589796
I/LnJ 1 54.1666666667 4.8284820277 63.6533272204 44.6800061129
I/LnJ 2 64.1666666667 4.8284820277 73.6533272204 54.6800061129
KK/HlJ 1 57.5714285714 3.1609834834 63.7819057257 51.3609514172
KK/HlJ 2 56.3636363636 3.5660703118 63.3699995155 49.3572732118
LP/J 1 61.125 4.1815880977 69.3406890366 52.9093109634
LP/J 2 59.4545454545 3.5660703118 66.4609086064 52.4481823027
MA/MyJ 1 58.1 3.7401260962 65.4483356672 50.7516643328
MA/MyJ 2 62.7 3.7401260962 70.0483356672 55.3516643328
NOD/ShiLtJ 1 55.375 4.1815880977 63.5906890366 47.1593109634
NOD/ShiLtJ 2 63.5 4.1815880977 71.7156890366 55.2843109634
NZB/BlNJ 1 55.8181818182 3.5660703118 62.82454497 48.8118186663
NZB/BlNJ 2 59.6363636364 3.5660703118 66.6427267882 52.6300004845
PL/J 1 66.6 3.7401260962 73.9483356672 59.2516643328
PL/J 2 57.5 5.9136586001 69.1187388598 45.8812611402
RIIIS/J 1 61.8888888889 3.9424390667 69.6347147954 54.1430629823
RIIIS/J 2 59.5833333333 3.4142523846 66.2914153417 52.875251325
SEA/GnJ 1 61.0 4.8284820277 70.4866605537 51.5133394463
SEA/GnJ 2 54.3333333333 6.8285047693 67.7494973501 40.9171693166
SJL/J 1 63.7 3.7401260962 71.0483356672 56.3516643328
SJL/J 2 63.6153846154 3.2803075859 70.0603013408 57.1704678899
SM/J 1 55.625 4.1815880977 63.8406890366 47.4093109634
SM/J 2 58.3636363636 3.5660703118 65.3699995155 51.3572732118
SWR/J 1 60.2857142857 4.4703057127 69.0686553061 51.5027732653
SWR/J 2 60.9285714286 3.1609834834 67.1390485828 54.7180942743


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 59.15 2.6446685251 64.3460579807 53.9539420193
A/J both 57.1442307692 2.6573528594 62.3652100343 51.9232515042
AKR/J both 63.6 3.7401260962 70.9483356672 56.2516643328
ALR/LtJ both 68.65 3.2390442126 75.0138453633 62.2861546367
ALS/LtJ both 57.3015873016 2.9802038084 63.1568813152 51.446293288
BALB/cJ both 57.7582417582 2.2777310223 62.2333668426 53.2831166739
BPH/2J both 59.65 2.6446685251 64.8460579807 54.4539420193
BPL/1J both 61.0111111111 3.2984811742 67.4917340196 54.5304882026
BPN/3J both 64.0 3.0012953937 69.896733271 58.103266729
BTBR T+ Itpr3tf/J both 65.8888888889 3.1167717468 72.0125019449 59.7652758329
BUB/BnJ both 58.8 2.8050945721 64.3112517504 53.2887482496
C3H/HeJ both 59.5050505051 2.6579918766 64.7272852659 54.2828157442
C57BL/6J both 62.1856060606 2.4685003957 67.0355413397 57.3356707815
C58/J both 59.3482142857 3.0606090972 65.3614829333 53.3349456381
CAST/EiJ both 57.1875 2.6573528594 62.4084792651 51.9665207349
CBA/J both 59.5 3.2390442126 65.8638453633 53.1361546367
CE/J both 63.4166666667 3.0538001698 69.4165576144 57.4167757189
DBA/2J both 59.3222222222 2.7171386149 64.6606643183 53.9837801262
FVB/NJ both 63.0 2.8592171408 68.6175879518 57.3824120482
I/LnJ both 59.1666666667 3.4142523846 65.874748675 52.4585846583
KK/HlJ both 56.9675324675 2.3826809507 61.6488557607 52.2862091744
LP/J both 60.2897727273 2.7478417207 65.6885381177 54.8910073369
MA/MyJ both 60.4 2.6446685251 65.5960579807 55.2039420193
NOD/ShiLtJ both 59.4375 2.9568293 65.2468694299 53.6281305701
NZB/BlNJ both 57.7272727273 2.5215924996 62.6815196234 52.7730258311
PL/J both 62.05 3.4985676088 68.9237386074 55.1762613926
RIIIS/J both 60.7361111111 2.6076783324 65.859493373 55.6127288492
SEA/GnJ both 57.6666666667 4.1815880977 65.8823557033 49.45097763
SJL/J both 63.6576923077 2.4874163842 68.5447923853 58.7705922301
SM/J both 56.9943181818 2.7478417207 62.3930835722 51.5955527914
SWR/J both 60.6071428571 2.7374919976 65.9855738424 55.2287118719




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA