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Project measure / variable:   Project1202   Ymaze.Prct.SponAlt_2_Ntg_HFD

ID, description, units MPD:130382   Ymaze.Prct.SponAlt_2_Ntg_HFD   Ymaze.Prct.SponAlt    2 Ntg HFD  
Data set, strains Project1202   F1 AD-BXD   41 strains     sex: both
Procedure None
Ontology mappings


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  STRAIN COMPARISON PLOT
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Project1202 - Ymaze.Prct.SponAlt 2 Ntg HFD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains39 strains
Mean of the strain means61.86   None 63.52   None
Median of the strain means62.33   None 64.4   None
SD of the strain means± 3.6792 ± 4.0077
Coefficient of variation (CV)0.0595 0.0631
Min–max range of strain means51.5   –   68.64   None 52.0   –   70.43   None
Mean sample size per strain15.7   mice 16.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 557.2065 557.2065 4.4789 0.0345
strain 38 8654.4245 227.748 1.8307 0.0017
sex:strain 38 4027.8647 105.9964 0.852 0.7245
Residuals 1181 146924.8236 124.4071


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD100)F1-ADtg f 64.6 12.876   5 5.7585 0.1993 47.0, 78.0 0.75
(B6.5XFAD x BXD113)F1 f 63.64 12.004   14 3.2082 0.1886 44.0, 79.0 0.49
(B6.5XFAD x BXD113)F1 m 66.71 8.2688   14 2.2099 0.1239 55.0, 81.0 0.79
(B6.5XFAD x BXD124)F1 f 60.86 8.7085   22 1.8567 0.1431 46.0, 85.0 -0.27
(B6.5XFAD x BXD124)F1 m 64.69 11.008   26 2.1589 0.1702 47.0, 89.0 0.29
(B6.5XFAD x BXD125)F1 f 66.07 8.5437   14 2.2834 0.1293 53.0, 83.0 1.15
(B6.5XFAD x BXD125)F1 m 60.6 7.9697   20 1.7821 0.1315 45.0, 74.0 -0.73
(B6.5XFAD x BXD12)F1 f 55.91 9.4282   11 2.8427 0.1686 46.0, 80.0 -1.62
(B6.5XFAD x BXD12)F1 m 58.4 7.9803   15 2.0605 0.1366 43.0, 70.0 -1.28
(B6.5XFAD x BXD14)F1-ADtg f 62.53 11.452   17 2.7774 0.1831 48.0, 85.0 0.18
(B6.5XFAD x BXD14)F1-ADtg m 58.24 11.135   21 2.4299 0.1912 42.0, 79.0 -1.32
(B6.5XFAD x BXD152)F1 f 68.64 10.269   11 3.0963 0.1496 58.0, 87.0 1.84
(B6.5XFAD x BXD152)F1 m 68.21 14.277   19 3.2754 0.2093 44.0, 88.0 1.17
(B6.5XFAD x BXD154)F1 f 62.85 11.9   20 2.6609 0.1893 48.0, 90.0 0.27
(B6.5XFAD x BXD154)F1 m 64.73 8.0664   15 2.0827 0.1246 48.0, 74.0 0.3
(B6.5XFAD x BXD161)F1 f 64.15 6.9983   20 1.5649 0.1091 48.0, 76.0 0.62
(B6.5XFAD x BXD161)F1 m 62.17 10.769   24 2.1982 0.1732 38.0, 82.0 -0.34
(B6.5XFAD x BXD169)F1 f 63.55 12.125   22 2.5851 0.1908 42.0, 88.0 0.46
(B6.5XFAD x BXD169)F1 m 63.05 8.9176   20 1.994 0.1414 42.0, 81.0 -0.12
(B6.5XFAD x BXD16)F1-ADtg f 60.0 8.1818   18 1.9285 0.1364 38.0, 71.0 -0.5
(B6.5XFAD x BXD16)F1-ADtg m 56.64 8.4175   11 2.538 0.1486 42.0, 70.0 -1.72
(B6.5XFAD x BXD19)F1 f 63.41 8.3133   22 1.7724 0.1311 52.0, 85.0 0.42
(B6.5XFAD x BXD19)F1 m 60.95 9.1498   19 2.0991 0.1501 44.0, 84.0 -0.64
(B6.5XFAD x BXD28)F1 f 60.56 17.005   25 3.401 0.2808 -0.35
(B6.5XFAD x BXD28)F1 m 62.92 17.611   26 3.4538 0.2799 10.0, 82.0 -0.15
(B6.5XFAD x BXD31)F1 f 58.2 8.6718   5 3.8781 0.149 48.0, 72.0 -0.99
(B6.5XFAD x BXD31)F1 m 65.5 14.223   6 5.8066 0.2171 44.0, 82.0 0.49
(B6.5XFAD x BXD32)F1-ADtg f 61.2 8.3187   5 3.7202 0.1359 55.0, 75.0 -0.18
(B6.5XFAD x BXD32)F1-ADtg m 58.5 16.08   8 5.6852 0.2749 32.0, 81.0 -1.25
(B6.5XFAD x BXD34)F1-ADtg f 66.88 8.0612   8 2.85 0.1205 55.0, 76.0 1.37
(B6.5XFAD x BXD34)F1-ADtg m 69.14 8.2347   7 3.1124 0.1191 54.0, 77.0 1.4
(B6.5XFAD x BXD38)F1 f 68.4 9.1099   20 2.037 0.1332 53.0, 92.0 1.78
(B6.5XFAD x BXD38)F1 m 65.68 8.1244   19 1.8639 0.1237 46.0, 81.0 0.54
(B6.5XFAD x BXD39)F1 f 63.1 7.622   20 1.7043 0.1208 50.0, 81.0 0.34
(B6.5XFAD x BXD39)F1 m 66.28 14.776   18 3.4827 0.2229 21.0, 85.0 0.69
(B6.5XFAD x BXD42)F1-ADtg f 58.83 9.7245   6 3.97 0.1653 46.0, 70.0 -0.82
(B6.5XFAD x BXD42)F1-ADtg m 52.0 8.8318   4 4.4159 0.1698 44.0, 64.0 -2.88
(B6.5XFAD x BXD48a)F1 f 57.0 7.6485   5 3.4205 0.1342 50.0, 69.0 -1.32
(B6.5XFAD x BXD48a)F1 m 70.43 10.13   7 3.8288 0.1438 57.0, 82.0 1.72
(B6.5XFAD x BXD49)F1 f 51.5 5.0662   4 2.5331 0.0984 44.0, 55.0 -2.81
(B6.5XFAD x BXD49)F1 m 66.75 10.34   4 5.17 0.1549 57.0, 78.0 0.8
(B6.5XFAD x BXD50)F1 f 63.0 6.229   16 1.5572 0.0989 52.0, 76.0 0.31
(B6.5XFAD x BXD50)F1 m 66.91 17.609   22 3.7543 0.2632 20.0, 100.0 0.84
(B6.5XFAD x BXD55)F1-ADtg f 61.7 7.8947   20 1.7653 0.128 46.0, 76.0 -0.04
(B6.5XFAD x BXD55)F1-ADtg m 64.63 6.2912   19 1.4433 0.0973 54.0, 79.0 0.28
(B6.5XFAD x BXD60)F1-ADtg f 60.75 6.2734   20 1.4028 0.1033 51.0, 75.0 -0.3
(B6.5XFAD x BXD60)F1-ADtg m 64.07 10.103   15 2.6085 0.1577 41.0, 76.0 0.14
(B6.5XFAD x BXD61)F1-ADtg f 62.33 17.504   15 4.5194 0.2808 18.0, 83.0 0.13
(B6.5XFAD x BXD61)F1-ADtg m 66.36 11.146   22 2.3764 0.168 44.0, 89.0 0.71
(B6.5XFAD x BXD62)F1-ADtg f 56.12 18.11   16 4.5276 0.3227 -1.56
(B6.5XFAD x BXD62)F1-ADtg m 66.14 13.727   14 3.6688 0.2075 43.0, 88.0 0.65
(B6.5XFAD x BXD65)F1-ADtg f 61.3 9.5482   20 2.135 0.1558 43.0, 80.0 -0.15
(B6.5XFAD x BXD65)F1-ADtg m 61.53 10.602   15 2.7375 0.1723 42.0, 83.0 -0.5
(B6.5XFAD x BXD66)F1-ADtg f 61.68 8.1993   19 1.881 0.1329 47.0, 77.0 -0.05
(B6.5XFAD x BXD66)F1-ADtg m 61.47 9.7987   17 2.3765 0.1594 44.0, 83.0 -0.51
(B6.5XFAD x BXD68)F1-ADtg f 66.65 8.0804   20 1.8068 0.1212 54.0, 86.0 1.3
(B6.5XFAD x BXD68)F1-ADtg m 65.28 9.1318   18 2.1524 0.1399 44.0, 79.0 0.44
(B6.5XFAD x BXD73)F1 f 64.85 7.075   26 1.3875 0.1091 54.0, 85.0 0.81
(B6.5XFAD x BXD73)F1 m 66.12 7.5089   16 1.8772 0.1136 54.0, 80.0 0.65
(B6.5XFAD x BXD74)F1 f 61.4 8.9113   20 1.9926 0.1451 43.0, 75.0 -0.12
(B6.5XFAD x BXD74)F1 m 64.4 10.018   20 2.2401 0.1556 43.0, 79.0 0.22
(B6.5XFAD x BXD75)F1-ADtg f 63.86 12.544   22 2.6745 0.1964 33.0, 87.0 0.54
(B6.5XFAD x BXD75)F1-ADtg m 64.09 12.436   22 2.6514 0.194 47.0, 90.0 0.14
(B6.5XFAD x BXD77)F1-ADtg f 59.88 20.307   16 5.0768 0.3392 -0.54
(B6.5XFAD x BXD77)F1-ADtg m 59.77 15.14   22 3.2279 0.2533 -0.94
(B6.5XFAD x BXD78)F1 f 53.33 12.583   3 7.2648 0.2359 40.0, 65.0 -2.32
(B6.5XFAD x BXD78)F1 m 60.0 16.971   2   12.0 0.2828 48.0, 72.0 -0.88
(B6.5XFAD x BXD83)F1 f 63.96 9.621   24 1.9639 0.1504 33.0, 78.0 0.57
(B6.5XFAD x BXD83)F1 m 70.0 9.9631   20 2.2278 0.1423 58.0, 90.0 1.62
(B6.5XFAD x BXD87)F1-ADtg f 61.29 13.176   14 3.5214 0.215 31.0, 78.0 -0.15
(B6.5XFAD x BXD87)F1-ADtg m 64.95 10.875   19 2.495 0.1674 44.0, 81.0 0.36
(B6.5XFAD x BXD89)F1-ADtg f 65.5 10.607   2   7.5 0.1619 58.0, 73.0 0.99
(B6.5XFAD x BXD99)F1-ADtg f 59.57 9.8427   14 2.6306 0.1652 39.0, 78.0 -0.62
(B6.5XFAD x BXD99)F1-ADtg m 61.25 11.887   12 3.4314 0.1941 33.0, 74.0 -0.57
(B6.5XFAD x D2)F1-ADtg f 63.16 17.655   19 4.0503 0.2795 0.35
(B6.5XFAD x D2)F1-ADtg m 60.67 11.011   9 3.6705 0.1815 40.0, 77.0 -0.71
(B6 x DBA/2J-Gpnmb+/SjJ)F1 f 64.79 6.7388   14 1.801 0.104 52.0, 76.0 0.8
(B6 x DBA/2J-Gpnmb+/SjJ)F1 m 69.64 12.46   11 3.7569 0.1789 54.0, 91.0 1.53
C57BL/6J f 59.07 9.0945   29 1.6888 0.154 43.0, 79.0 -0.76
C57BL/6J m 58.6 6.8981   25 1.3796 0.1177 46.0, 74.0 -1.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 61.2 4.9881285596 70.9865820681 51.4134179319
129S1/SvImJ 2 58.5 3.9434618775 66.2369724609 50.7630275391
A/J 1 66.875 3.9434618775 74.6119724609 59.1380275391
A/J 2 69.1428571429 4.2157380753 77.414028617 60.8716856687
AKR/J 1 61.2857142857 2.9809769807 67.1343157234 55.437112848
AKR/J 2 64.9473684211 2.5588559598 69.9677790925 59.9269577496
ALR/LtJ 1 60.8636363636 2.3779969859 65.5292063029 56.1980664244
ALR/LtJ 2 64.6923076923 2.1874390773 68.9840078345 60.4006075501
ALS/LtJ 1 66.0714285714 2.9809769807 71.9200300091 60.2228271337
ALS/LtJ 2 60.6 2.4940642798 65.4932910341 55.7067089659
BALB/cJ 1 58.8333333333 4.553517553 67.7672195993 49.8994470673
BALB/cJ 2 52.0 5.5768972699 62.9417313859 41.0582686141
BPH/2J 1 63.0 2.7884486349 68.4708656929 57.5291343071
BPH/2J 2 66.9090909091 2.3779969859 71.5746608484 62.2435209698
BPL/1J 1 55.9090909091 3.3629955888 62.5072031934 49.3109786248
BPL/1J 2 58.4 2.8798973666 64.0502857915 52.7497142085
BPN/3J 1 63.5454545455 2.3779969859 68.2110244847 58.8798846062
BPN/3J 2 63.05 2.4940642798 67.9432910341 58.1567089659
BTBR T+ Itpr3tf/J 1 62.5294117647 2.7051925302 67.836931086 57.2218924434
BTBR T+ Itpr3tf/J 2 58.2380952381 2.4339575126 63.0134583152 53.462732161
BUB/BnJ 1 68.6363636364 3.3629955888 75.2344759207 62.038251352
BUB/BnJ 2 68.2105263158 2.5588559598 73.2309369872 63.1901156444
C3H/HeJ 1 61.7 2.4940642798 66.5932910341 56.8067089659
C3H/HeJ 2 64.6315789474 2.5588559598 69.6519896188 59.611168276
C57BL/10J 1 63.9583333333 2.2767587765 68.4252764663 59.4913902003
C57BL/10J 2 70.0 2.4940642798 74.8932910341 65.1067089659
C57BL/6J 1 60.75 2.4940642798 65.6432910341 55.8567089659
C57BL/6J 2 64.0666666667 2.8798973666 69.7169524582 58.4163808752
C57BLKS/J 1 64.8461538462 2.1874390773 69.1378539884 60.5544537039
C57BLKS/J 2 66.125 2.7884486349 71.5958656929 60.6541343071
C57BR/cdJ 1 63.1 2.4940642798 67.9932910341 58.2067089659
C57BR/cdJ 2 66.2777777778 2.628974585 71.4357594184 61.1197961372
C57L/J 1 53.3333333333 6.43964628 65.9677564554 40.6989102113
C57L/J 2 60.0 7.886923755 75.4739449217 44.5260550783
C58/J 1 63.4090909091 2.3779969859 68.0746608484 58.7435209698
C58/J 2 60.9473684211 2.5588559598 65.9677790925 55.9269577496
CAST/EiJ 1 60.0 2.628974585 65.1579816406 54.8420183594
CAST/EiJ 2 56.6363636364 3.3629955888 63.2344759207 50.038251352
CBA/J 1 59.5714285714 2.9809769807 65.4200300091 53.7228271337
CBA/J 2 61.25 3.21982314 67.567211561 54.932788439
CE/J 1 62.85 2.4940642798 67.7432910341 57.9567089659
CE/J 2 64.7333333333 2.8798973666 70.3836191248 59.0830475418
DBA/2J 1 62.3333333333 2.8798973666 67.9836191248 56.6830475418
DBA/2J 2 66.3636363636 2.3779969859 71.0292063029 61.6980664244
FVB/NJ 1 56.125 2.7884486349 61.5958656929 50.6541343071
FVB/NJ 2 66.1428571429 2.9809769807 71.9914585806 60.2942557051
I/LnJ 1 58.2 4.9881285596 67.9865820681 48.4134179319
I/LnJ 2 65.5 4.553517553 74.433886266 56.566113734
KK/HlJ 1 63.6428571429 2.9809769807 69.4914585806 57.7942557051
KK/HlJ 2 66.7142857143 2.9809769807 72.562887152 60.8656842766
LP/J 1 61.3 2.4940642798 66.1932910341 56.4067089659
LP/J 2 61.5333333333 2.8798973666 67.1836191248 55.8830475418
MA/MyJ 1 64.7857142857 2.9809769807 70.6343157234 58.937112848
MA/MyJ 2 69.6363636364 3.3629955888 76.2344759207 63.038251352
NOD/ShiLtJ 1 63.8636363636 2.3779969859 68.5292063029 59.1980664244
NOD/ShiLtJ 2 64.0909090909 2.3779969859 68.7564790302 59.4253391516
NON/ShiLtJ 1 51.5 5.5768972699 62.4417313859 40.5582686141
NON/ShiLtJ 2 66.75 5.5768972699 77.6917313859 55.8082686141
NZB/BlNJ 1 61.6842105263 2.5588559598 66.7046211977 56.6637998549
NZB/BlNJ 2 61.4705882353 2.7051925302 66.7781075566 56.163068914
NZW/LacJ 1 61.4 2.4940642798 66.2932910341 56.5067089659
NZW/LacJ 2 64.4 2.4940642798 69.2932910341 59.5067089659
PL/J 1 59.875 2.7884486349 65.3458656929 54.4041343071
PL/J 2 59.7727272727 2.3779969859 64.438297212 55.1071573335
RBF/DnJ 1 57.0 4.9881285596 66.7865820681 47.2134179319
RBF/DnJ 2 70.4285714286 4.2157380753 78.6997429027 62.1573999544
RIIIS/J 1 64.15 2.4940642798 69.0432910341 59.2567089659
RIIIS/J 2 62.1666666667 2.2767587765 66.6336097997 57.6997235337
SEA/GnJ 1 60.56 2.2307589079 64.9366925543 56.1833074457
SEA/GnJ 2 62.9230769231 2.1874390773 67.2147770653 58.6313767808
SJL/J 1 63.1578947368 2.5588559598 68.1783054082 58.1374840654
SJL/J 2 60.6666666667 3.7179315132 67.9611542572 53.3721790761
SM/J 1 68.4 2.4940642798 73.2932910341 63.5067089659
SM/J 2 65.6842105263 2.5588559598 70.7046211977 60.6637998549
SPRET/EiJ 1 59.0689655172 2.071207649 63.1326225371 55.0053084974
SPRET/EiJ 2 58.6 2.2307589079 62.9766925543 54.2233074457
SWR/J 1 66.65 2.4940642798 71.5432910341 61.7567089659
SWR/J 2 65.2777777778 2.628974585 70.4357594184 60.1197961372


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 59.85 3.1793206077 66.0877466171 53.6122533829
A/J both 68.0089285714 2.8863185504 73.6718125631 62.3460445797
AKR/J both 63.1165413534 1.9643044305 66.9704569624 59.2626257443
ALR/LtJ both 62.777972028 1.6155308247 65.947602644 59.6083414119
ALS/LtJ both 63.3357142857 1.9433592303 67.1485359417 59.5228926297
BALB/cJ both 55.4166666667 3.5998717083 62.479523906 48.3538094273
BPH/2J both 64.9545454545 1.8323697399 68.5496085377 61.3594823714
BPL/1J both 57.1545454545 2.2137947157 61.4979546927 52.8111362163
BPN/3J both 63.2977272727 1.7230225112 66.678253859 59.9172006864
BTBR T+ Itpr3tf/J both 60.3837535014 1.8194927726 63.9535523005 56.8139547023
BUB/BnJ both 68.4234449761 2.1129057689 72.5689126525 64.2779772996
C3H/HeJ both 63.1657894737 1.786623943 66.6711004604 59.660478487
C57BL/10J both 66.9791666667 1.6884894994 70.2919403572 63.6663929762
C57BL/6J both 62.4083333333 1.9048730584 66.1456460935 58.6710205732
C57BLKS/J both 65.4855769231 1.7720281817 68.9622513952 62.0089024509
C57BR/cdJ both 64.6888888889 1.8118956924 68.2437824087 61.1339953691
C57L/J both 56.6666666667 5.0909873926 66.6550551637 46.6782781697
C58/J both 62.1782296651 1.7466119695 65.6050381718 58.7514211583
CAST/EiJ both 58.3181818182 2.1343176134 62.5056589919 54.1307046445
CBA/J both 60.4107142857 2.1939396535 64.7151683941 56.1062601773
CE/J both 63.7916666667 1.9048730584 67.5289794268 60.0543539065
DBA/2J both 64.3484848485 1.8673964836 68.0122695168 60.6847001802
FVB/NJ both 61.1339285714 2.0409354197 65.138192243 57.1296648998
I/LnJ both 61.85 3.3769789988 68.475547381 55.224452619
KK/HlJ both 65.1785714286 2.1078690376 69.3141571656 61.0429856915
LP/J both 61.4166666667 1.9048730584 65.1539794268 57.6793539065
MA/MyJ both 67.211038961 2.246995944 71.6195881695 62.8024897526
NOD/ShiLtJ both 63.9772727273 1.6814977944 67.2763288694 60.6782165851
NON/ShiLtJ both 59.125 3.9434618775 66.8619724609 51.3880275391
NZB/BlNJ both 61.5773993808 1.8618411887 65.2302847012 57.9245140604
NZW/LacJ both 62.9 1.763569765 66.3600792725 59.4399207275
PL/J both 59.8238636364 1.8323697399 63.4189267196 56.2288005532
RBF/DnJ both 63.7142857143 3.2654966715 70.1211075889 57.3074638397
RIIIS/J both 63.1583333333 1.6884894994 66.4711070238 59.8455596428
SEA/GnJ both 61.7415384615 1.5621439612 64.8064254018 58.6766515213
SJL/J both 61.9122807018 2.2566988368 66.3398667404 57.4846946631
SM/J both 67.0421052632 1.786623943 70.5474162498 63.5367942765
SPRET/EiJ both 58.8344827586 1.5220205674 61.8206486151 55.8483169021
SWR/J both 65.9638888889 1.8118956924 69.5187824087 62.4089953691




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA