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Project measure / variable:   Bennett4   CARN_base_HFHS

ID, description, units MPD:114782   CARN_base_HFHS   plasma carnitine amount, baseline   [µM]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma carnitine amount, baseline HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means17.975   µM
Median of the strain means18.3   µM
SD of the strain means± 3.6781
Coefficient of variation (CV)0.2046
Min–max range of strain means10.45   –   24.775   µM
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1245.6885 59.3185 2.5951 0.0012
Residuals 79 1805.7652 22.8578


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 13.06 0.91542   5 0.40939 0.0701 12.0, 14.2 -1.34
CC002/Unc f 19.96 4.1052   5 1.8359 0.2057 16.0, 25.4 0.54
CC004/TauUnc f 20.16 3.1919   5 1.4274 0.1583 16.3, 24.9 0.59
CC006/TauUnc f 10.45 1.464   4 0.73201 0.1401 8.4, 11.6 -2.05
CC008/GeniUnc f 20.75 6.0479   4 3.0239 0.2915 13.8, 26.3 0.75
CC011/Unc f 24.18 3.8893   5 1.7394 0.1608 18.8, 27.5 1.69
CC012/GeniUnc f 15.62 4.202   5 1.8792 0.269 12.1, 22.0 -0.64
CC019/TauUnc f 17.52 6.3606   5 2.8445 0.363 9.1, 26.6 -0.12
CC024/GeniUnc f 20.35 3.8891   2   2.75 0.1911 17.6, 23.1 0.65
CC027/GeniUnc f 14.9 2.8187   5 1.2606 0.1892 10.1, 17.4 -0.84
CC028/GeniUnc f 24.775 3.6179   4 1.8089 0.146 21.7, 28.7 1.85
CC030/GeniUnc f 14.58 3.2206   5 1.4403 0.2209 10.6, 17.6 -0.92
CC032/GeniUnc f 14.08 3.4018   5 1.5213 0.2416 10.8, 18.4 -1.06
CC035/Unc f 18.16 3.6583   5 1.636 0.2014 12.9, 23.2 0.05
CC036/Unc f 16.96 4.4066   5 1.9707 0.2598 12.4, 21.9 -0.28
CC037/TauUnc f 13.44 3.536   5 1.5813 0.2631 9.2, 17.5 -1.23
CC040/TauUnc f 18.44 7.7713   5 3.4754 0.4214 12.1, 30.2 0.13
CC041/TauUnc f 20.3 7.4387   5 3.3267 0.3664 8.9, 29.4 0.63
CC045/GeniUnc f 16.45 2.1205   4 1.0603 0.1289 13.5, 18.5 -0.41
CC059/TauUnc f 19.54 6.0735   5 2.7162 0.3108 12.6, 28.6 0.43
CC063/Unc f 22.567 6.0277   3 3.4801 0.2671 16.9, 28.9 1.25
CC071/TauUnc f 19.2 7.6377   5 3.4157 0.3978 13.2, 32.2 0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 13.06 2.1381200584 17.3158215197 8.8041784803
CC002/Unc f 19.96 2.1381200584 24.2158215197 15.7041784803
CC004/TauUnc f 20.16 2.1381200584 24.4158215197 15.9041784803
CC006/TauUnc f 10.45 2.3904908973 15.208153109 5.691846891
CC008/GeniUnc f 20.75 2.3904908973 25.508153109 15.991846891
CC011/Unc f 24.18 2.1381200584 28.4358215197 19.9241784803
CC012/GeniUnc f 15.62 2.1381200584 19.8758215197 11.3641784803
CC019/TauUnc f 17.52 2.1381200584 21.7758215197 13.2641784803
CC024/GeniUnc f 20.35 3.3806646477 27.0790446586 13.6209553414
CC027/GeniUnc f 14.9 2.1381200584 19.1558215197 10.6441784803
CC028/GeniUnc f 24.775 2.3904908973 29.533153109 20.016846891
CC030/GeniUnc f 14.58 2.1381200584 18.8358215197 10.3241784803
CC032/GeniUnc f 14.08 2.1381200584 18.3358215197 9.8241784803
CC035/Unc f 18.16 2.1381200584 22.4158215197 13.9041784803
CC036/Unc f 16.96 2.1381200584 21.2158215197 12.7041784803
CC037/TauUnc f 13.44 2.1381200584 17.6958215197 9.1841784803
CC040/TauUnc f 18.44 2.1381200584 22.6958215197 14.1841784803
CC041/TauUnc f 20.3 2.1381200584 24.5558215197 16.0441784803
CC045/GeniUnc f 16.45 2.3904908973 21.208153109 11.691846891
CC059/TauUnc f 19.54 2.1381200584 23.7958215197 15.2841784803
CC063/Unc f 22.5666666667 2.7603011261 28.0609086234 17.07242471
CC071/TauUnc f 19.2 2.1381200584 23.4558215197 14.9441784803




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA